Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-AP01891 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
HLA-AP01891 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-AP01891 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-AP01891 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-AP01891 TSPY13P-201ENST00000338964 914 ntBASIC18.29■□□□□ 0.52
HLA-AP01891 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-AP01891 IDNK-203ENST00000405990 629 ntTSL 2 BASIC18.29■□□□□ 0.52
HLA-AP01891 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-AP01891 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC18.29■□□□□ 0.52
HLA-AP01891 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC18.29■□□□□ 0.52
HLA-AP01891 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC18.29■□□□□ 0.52
HLA-AP01891 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC18.29■□□□□ 0.52
HLA-AP01891 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-AP01891 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-AP01891 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-AP01891 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
HLA-AP01891 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.29■□□□□ 0.52
HLA-AP01891 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
HLA-AP01891 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.29■□□□□ 0.52
HLA-AP01891 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-AP01891 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-AP01891 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-AP01891 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HLA-AP01891 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.29■□□□□ 0.52
HLA-AP01891 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-AP01891 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-AP01891 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-AP01891 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-AP01891 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.28■□□□□ 0.52
HLA-AP01891 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.28■□□□□ 0.52
HLA-AP01891 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-AP01891 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-AP01891 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-AP01891 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-AP01891 AC011551.1-201ENST00000614101 683 ntBASIC18.28■□□□□ 0.52
HLA-AP01891 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-AP01891 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-AP01891 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
HLA-AP01891 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.28■□□□□ 0.52
HLA-AP01891 AL157384.1-201ENST00000445995 2473 ntBASIC18.28■□□□□ 0.52
HLA-AP01891 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HLA-AP01891 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
HLA-AP01891 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
HLA-AP01891 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HLA-AP01891 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.27■□□□□ 0.52
HLA-AP01891 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
HLA-AP01891 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
HLA-AP01891 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
HLA-AP01891 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.27■□□□□ 0.52
HLA-AP01891 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
HLA-AP01891 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HLA-AP01891 BHLHE23-202ENST00000612929 1109 ntBASIC18.27■□□□□ 0.52
HLA-AP01891 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HLA-AP01891 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.27■□□□□ 0.52
HLA-AP01891 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
HLA-AP01891 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
HLA-AP01891 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.26■□□□□ 0.51
HLA-AP01891 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
HLA-AP01891 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-AP01891 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
HLA-AP01891 AC139795.1-202ENST00000500444 432 ntBASIC18.26■□□□□ 0.51
HLA-AP01891 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
HLA-AP01891 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC18.26■□□□□ 0.51
HLA-AP01891 AC087393.1-201ENST00000582896 145 ntBASIC18.26■□□□□ 0.51
HLA-AP01891 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-AP01891 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
HLA-AP01891 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
HLA-AP01891 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.26■□□□□ 0.51
HLA-AP01891 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.26■□□□□ 0.51
HLA-AP01891 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
HLA-AP01891 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-AP01891 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.25■□□□□ 0.51
HLA-AP01891 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.25■□□□□ 0.51
HLA-AP01891 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
HLA-AP01891 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-AP01891 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-AP01891 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
HLA-AP01891 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-AP01891 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-AP01891 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.25■□□□□ 0.51
HLA-AP01891 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-AP01891 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
HLA-AP01891 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-AP01891 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-AP01891 LINC01521-201ENST00000504184 1943 ntBASIC18.25■□□□□ 0.51
HLA-AP01891 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
HLA-AP01891 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.25■□□□□ 0.51
HLA-AP01891 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.24■□□□□ 0.51
HLA-AP01891 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
HLA-AP01891 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
HLA-AP01891 GUK1-208ENST00000366728 842 ntTSL 2 BASIC18.24■□□□□ 0.51
HLA-AP01891 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HLA-AP01891 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
HLA-AP01891 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HLA-AP01891 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
HLA-AP01891 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
HLA-AP01891 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HLA-AP01891 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HLA-AP01891 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms