Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CNOT4O95628 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CNOT4O95628 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.25■□□□□ 0.67
CNOT4O95628 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.25■□□□□ 0.67
CNOT4O95628 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNOT4O95628 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.25■□□□□ 0.67
CNOT4O95628 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.25■□□□□ 0.67
CNOT4O95628 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNOT4O95628 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNOT4O95628 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNOT4O95628 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.25■□□□□ 0.67
CNOT4O95628 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.25■□□□□ 0.67
CNOT4O95628 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CNOT4O95628 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.25■□□□□ 0.67
CNOT4O95628 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CNOT4O95628 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.25■□□□□ 0.67
CNOT4O95628 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.25■□□□□ 0.67
CNOT4O95628 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.25■□□□□ 0.67
CNOT4O95628 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CNOT4O95628 OXCT2P1-201ENST00000447263 1535 ntBASIC19.25■□□□□ 0.67
CNOT4O95628 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.25■□□□□ 0.67
CNOT4O95628 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CNOT4O95628 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNOT4O95628 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNOT4O95628 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNOT4O95628 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNOT4O95628 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CNOT4O95628 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNOT4O95628 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNOT4O95628 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.24■□□□□ 0.67
CNOT4O95628 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.24■□□□□ 0.67
CNOT4O95628 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.24■□□□□ 0.67
CNOT4O95628 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CNOT4O95628 AC012414.1-201ENST00000556676 535 ntBASIC19.24■□□□□ 0.67
CNOT4O95628 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNOT4O95628 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNOT4O95628 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CNOT4O95628 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.24■□□□□ 0.67
CNOT4O95628 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.24■□□□□ 0.67
CNOT4O95628 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CNOT4O95628 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CNOT4O95628 DUSP8P5-201ENST00000422884 1815 ntBASIC19.23■□□□□ 0.67
CNOT4O95628 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNOT4O95628 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNOT4O95628 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.23■□□□□ 0.67
CNOT4O95628 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.23■□□□□ 0.67
CNOT4O95628 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.23■□□□□ 0.67
CNOT4O95628 AC027612.3-201ENST00000413684 1047 ntBASIC19.23■□□□□ 0.67
CNOT4O95628 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CNOT4O95628 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.23■□□□□ 0.67
CNOT4O95628 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.23■□□□□ 0.67
CNOT4O95628 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
CNOT4O95628 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CNOT4O95628 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNOT4O95628 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CNOT4O95628 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CNOT4O95628 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CNOT4O95628 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.23■□□□□ 0.67
CNOT4O95628 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.23■□□□□ 0.67
CNOT4O95628 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
CNOT4O95628 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNOT4O95628 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNOT4O95628 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNOT4O95628 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNOT4O95628 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNOT4O95628 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CNOT4O95628 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CNOT4O95628 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNOT4O95628 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNOT4O95628 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.22■□□□□ 0.67
CNOT4O95628 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.22■□□□□ 0.67
CNOT4O95628 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CNOT4O95628 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNOT4O95628 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNOT4O95628 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CNOT4O95628 LINC01960-201ENST00000563759 1884 ntBASIC19.22■□□□□ 0.67
CNOT4O95628 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CNOT4O95628 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNOT4O95628 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CNOT4O95628 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.21■□□□□ 0.67
CNOT4O95628 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.21■□□□□ 0.67
CNOT4O95628 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.21■□□□□ 0.67
CNOT4O95628 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
CNOT4O95628 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CNOT4O95628 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CNOT4O95628 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CNOT4O95628 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CNOT4O95628 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CNOT4O95628 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.21■□□□□ 0.67
CNOT4O95628 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CNOT4O95628 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.21■□□□□ 0.67
CNOT4O95628 AC105233.4-201ENST00000642045 216 ntBASIC19.21■□□□□ 0.67
CNOT4O95628 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
CNOT4O95628 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNOT4O95628 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CNOT4O95628 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CNOT4O95628 AC123595.1-201ENST00000440769 1046 ntBASIC19.2■□□□□ 0.66
CNOT4O95628 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.2■□□□□ 0.66
CNOT4O95628 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.2■□□□□ 0.66
CNOT4O95628 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms