Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NKX2-2O95096 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
NKX2-2O95096 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.15■□□□□ 0.82
NKX2-2O95096 PBX2P1-201ENST00000493219 1291 ntBASIC20.15■□□□□ 0.82
NKX2-2O95096 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.15■□□□□ 0.82
NKX2-2O95096 AC106739.1-201ENST00000617035 715 ntBASIC20.15■□□□□ 0.82
NKX2-2O95096 AC110285.6-201ENST00000617652 491 ntBASIC20.15■□□□□ 0.82
NKX2-2O95096 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
NKX2-2O95096 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.15■□□□□ 0.82
NKX2-2O95096 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NKX2-2O95096 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NKX2-2O95096 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.14■□□□□ 0.81
NKX2-2O95096 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
NKX2-2O95096 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NKX2-2O95096 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NKX2-2O95096 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NKX2-2O95096 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
NKX2-2O95096 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
NKX2-2O95096 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NKX2-2O95096 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
NKX2-2O95096 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.14■□□□□ 0.81
NKX2-2O95096 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
NKX2-2O95096 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NKX2-2O95096 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
NKX2-2O95096 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NKX2-2O95096 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NKX2-2O95096 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NKX2-2O95096 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NKX2-2O95096 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.13■□□□□ 0.81
NKX2-2O95096 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.13■□□□□ 0.81
NKX2-2O95096 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NKX2-2O95096 AC233992.3-201ENST00000607491 485 ntBASIC20.13■□□□□ 0.81
NKX2-2O95096 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NKX2-2O95096 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.13■□□□□ 0.81
NKX2-2O95096 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NKX2-2O95096 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
NKX2-2O95096 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NKX2-2O95096 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NKX2-2O95096 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
NKX2-2O95096 OXCT2P1-201ENST00000447263 1535 ntBASIC20.12■□□□□ 0.81
NKX2-2O95096 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
NKX2-2O95096 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NKX2-2O95096 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NKX2-2O95096 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.12■□□□□ 0.81
NKX2-2O95096 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.12■□□□□ 0.81
NKX2-2O95096 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.12■□□□□ 0.81
NKX2-2O95096 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.12■□□□□ 0.81
NKX2-2O95096 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.12■□□□□ 0.81
NKX2-2O95096 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
NKX2-2O95096 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
NKX2-2O95096 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NKX2-2O95096 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
NKX2-2O95096 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NKX2-2O95096 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.11■□□□□ 0.81
NKX2-2O95096 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.11■□□□□ 0.81
NKX2-2O95096 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.11■□□□□ 0.81
NKX2-2O95096 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NKX2-2O95096 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
NKX2-2O95096 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NKX2-2O95096 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NKX2-2O95096 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.11■□□□□ 0.81
NKX2-2O95096 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.11■□□□□ 0.81
NKX2-2O95096 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.11■□□□□ 0.81
NKX2-2O95096 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NKX2-2O95096 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.1■□□□□ 0.81
NKX2-2O95096 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.1■□□□□ 0.81
NKX2-2O95096 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
NKX2-2O95096 EDA-201ENST00000338901 1233 ntBASIC20.1■□□□□ 0.81
NKX2-2O95096 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.1■□□□□ 0.81
NKX2-2O95096 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.1■□□□□ 0.81
NKX2-2O95096 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NKX2-2O95096 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
NKX2-2O95096 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.1■□□□□ 0.81
NKX2-2O95096 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
NKX2-2O95096 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NKX2-2O95096 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
NKX2-2O95096 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
NKX2-2O95096 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NKX2-2O95096 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.09■□□□□ 0.81
NKX2-2O95096 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.09■□□□□ 0.81
NKX2-2O95096 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NKX2-2O95096 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NKX2-2O95096 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NKX2-2O95096 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.09■□□□□ 0.81
NKX2-2O95096 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NKX2-2O95096 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.09■□□□□ 0.81
NKX2-2O95096 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NKX2-2O95096 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NKX2-2O95096 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
NKX2-2O95096 C11orf96-202ENST00000528572 1834 ntBASIC20.09■□□□□ 0.81
NKX2-2O95096 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NKX2-2O95096 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
NKX2-2O95096 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
NKX2-2O95096 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NKX2-2O95096 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
NKX2-2O95096 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NKX2-2O95096 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NKX2-2O95096 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NKX2-2O95096 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.08■□□□□ 0.81
NKX2-2O95096 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms