Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CPNE3O75131 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.82■□□□□ 0.92
CPNE3O75131 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CPNE3O75131 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CPNE3O75131 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CPNE3O75131 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CPNE3O75131 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CPNE3O75131 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CPNE3O75131 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
CPNE3O75131 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CPNE3O75131 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CPNE3O75131 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.81■□□□□ 0.92
CPNE3O75131 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.81■□□□□ 0.92
CPNE3O75131 TERF1P2-201ENST00000583350 1212 ntBASIC20.81■□□□□ 0.92
CPNE3O75131 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.81■□□□□ 0.92
CPNE3O75131 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CPNE3O75131 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CPNE3O75131 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CPNE3O75131 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CPNE3O75131 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CPNE3O75131 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.8■□□□□ 0.92
CPNE3O75131 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CPNE3O75131 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CPNE3O75131 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CPNE3O75131 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CPNE3O75131 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CPNE3O75131 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CPNE3O75131 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CPNE3O75131 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CPNE3O75131 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CPNE3O75131 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.8■□□□□ 0.92
CPNE3O75131 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CPNE3O75131 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.8■□□□□ 0.92
CPNE3O75131 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CPNE3O75131 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CPNE3O75131 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.79■□□□□ 0.92
CPNE3O75131 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CPNE3O75131 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CPNE3O75131 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CPNE3O75131 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CPNE3O75131 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CPNE3O75131 AC022517.1-201ENST00000592429 346 ntBASIC20.79■□□□□ 0.92
CPNE3O75131 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CPNE3O75131 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.79■□□□□ 0.92
CPNE3O75131 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.79■□□□□ 0.92
CPNE3O75131 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.79■□□□□ 0.92
CPNE3O75131 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CPNE3O75131 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
CPNE3O75131 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPNE3O75131 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPNE3O75131 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPNE3O75131 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.78■□□□□ 0.92
CPNE3O75131 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPNE3O75131 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPNE3O75131 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.78■□□□□ 0.92
CPNE3O75131 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPNE3O75131 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.78■□□□□ 0.92
CPNE3O75131 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.78■□□□□ 0.92
CPNE3O75131 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CPNE3O75131 AC010141.3-201ENST00000456659 717 ntBASIC20.78■□□□□ 0.92
CPNE3O75131 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CPNE3O75131 AL137784.2-201ENST00000607332 1000 ntBASIC20.78■□□□□ 0.92
CPNE3O75131 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CPNE3O75131 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CPNE3O75131 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CPNE3O75131 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.78■□□□□ 0.92
CPNE3O75131 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPNE3O75131 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CPNE3O75131 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
CPNE3O75131 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CPNE3O75131 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.77■□□□□ 0.92
CPNE3O75131 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CPNE3O75131 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CPNE3O75131 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CPNE3O75131 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.77■□□□□ 0.92
CPNE3O75131 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CPNE3O75131 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CPNE3O75131 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CPNE3O75131 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.91
CPNE3O75131 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.77■□□□□ 0.91
CPNE3O75131 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPNE3O75131 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CPNE3O75131 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.76■□□□□ 0.91
CPNE3O75131 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPNE3O75131 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPNE3O75131 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPNE3O75131 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPNE3O75131 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CPNE3O75131 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CPNE3O75131 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CPNE3O75131 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CPNE3O75131 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.76■□□□□ 0.91
CPNE3O75131 NTF6G-201ENST00000591094 616 ntBASIC20.76■□□□□ 0.91
CPNE3O75131 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPNE3O75131 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPNE3O75131 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPNE3O75131 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CPNE3O75131 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.76■□□□□ 0.91
CPNE3O75131 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.76■□□□□ 0.91
CPNE3O75131 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms