Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SNAI2O43623 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SNAI2O43623 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SNAI2O43623 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SNAI2O43623 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SNAI2O43623 FBXW4P1-201ENST00000426721 2239 ntBASIC16.17■□□□□ 0.18
SNAI2O43623 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SNAI2O43623 MIR4281-201ENST00000580852 62 ntBASIC16.17■□□□□ 0.18
SNAI2O43623 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SNAI2O43623 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
SNAI2O43623 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SNAI2O43623 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SNAI2O43623 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SNAI2O43623 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SNAI2O43623 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SNAI2O43623 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC16.16■□□□□ 0.18
SNAI2O43623 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC16.16■□□□□ 0.18
SNAI2O43623 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNAI2O43623 KRT18P24-201ENST00000344739 1156 ntBASIC16.16■□□□□ 0.18
SNAI2O43623 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC16.16■□□□□ 0.18
SNAI2O43623 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNAI2O43623 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNAI2O43623 AC139795.1-202ENST00000500444 432 ntBASIC16.16■□□□□ 0.18
SNAI2O43623 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNAI2O43623 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SNAI2O43623 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC16.16■□□□□ 0.18
SNAI2O43623 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNAI2O43623 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SNAI2O43623 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNAI2O43623 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SNAI2O43623 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
SNAI2O43623 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC16.16■□□□□ 0.18
SNAI2O43623 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SNAI2O43623 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
SNAI2O43623 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SNAI2O43623 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SNAI2O43623 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SNAI2O43623 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNAI2O43623 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNAI2O43623 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNAI2O43623 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNAI2O43623 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNAI2O43623 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SNAI2O43623 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SNAI2O43623 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC16.15■□□□□ 0.18
SNAI2O43623 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SNAI2O43623 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC16.15■□□□□ 0.18
SNAI2O43623 LSM7-203ENST00000585409 512 ntTSL 2 BASIC16.15■□□□□ 0.18
SNAI2O43623 THA1P-201ENST00000590384 1145 ntBASIC16.15■□□□□ 0.18
SNAI2O43623 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNAI2O43623 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNAI2O43623 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SNAI2O43623 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SNAI2O43623 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SNAI2O43623 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNAI2O43623 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SNAI2O43623 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC16.14■□□□□ 0.18
SNAI2O43623 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SNAI2O43623 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SNAI2O43623 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SNAI2O43623 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SNAI2O43623 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC16.14■□□□□ 0.17
SNAI2O43623 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SNAI2O43623 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SNAI2O43623 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SNAI2O43623 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC16.14■□□□□ 0.17
SNAI2O43623 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SNAI2O43623 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SNAI2O43623 RARRES2P2-201ENST00000394842 485 ntBASIC16.14■□□□□ 0.17
SNAI2O43623 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SNAI2O43623 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC16.14■□□□□ 0.17
SNAI2O43623 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SNAI2O43623 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SNAI2O43623 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SNAI2O43623 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SNAI2O43623 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SNAI2O43623 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
SNAI2O43623 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SNAI2O43623 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SNAI2O43623 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SNAI2O43623 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SNAI2O43623 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SNAI2O43623 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SNAI2O43623 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SNAI2O43623 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SNAI2O43623 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SNAI2O43623 KRT18P60-201ENST00000312876 1297 ntBASIC16.13■□□□□ 0.17
SNAI2O43623 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC16.13■□□□□ 0.17
SNAI2O43623 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
SNAI2O43623 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SNAI2O43623 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SNAI2O43623 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SNAI2O43623 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
SNAI2O43623 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SNAI2O43623 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SNAI2O43623 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SNAI2O43623 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SNAI2O43623 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SNAI2O43623 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SNAI2O43623 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms