Protein–RNA interactions for Protein: O15118

NPC1, Niemann-Pick C1 protein, humanhuman

Predictions only

Length 1,278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1O15118 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
NPC1O15118 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC22.07■■□□□ 1.12
NPC1O15118 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC22.07■■□□□ 1.12
NPC1O15118 AC016769.1-201ENST00000409132 1010 ntBASIC22.07■■□□□ 1.12
NPC1O15118 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC22.07■■□□□ 1.12
NPC1O15118 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC22.07■■□□□ 1.12
NPC1O15118 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC22.07■■□□□ 1.12
NPC1O15118 AC009237.3-201ENST00000393279 1427 ntBASIC22.06■■□□□ 1.12
NPC1O15118 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.06■■□□□ 1.12
NPC1O15118 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NPC1O15118 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
NPC1O15118 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC22.06■■□□□ 1.12
NPC1O15118 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC22.06■■□□□ 1.12
NPC1O15118 AC137761.2-201ENST00000561729 223 ntBASIC22.06■■□□□ 1.12
NPC1O15118 AC145350.3-201ENST00000569033 163 ntBASIC22.06■■□□□ 1.12
NPC1O15118 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC22.06■■□□□ 1.12
NPC1O15118 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
NPC1O15118 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NPC1O15118 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NPC1O15118 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
NPC1O15118 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.06■■□□□ 1.12
NPC1O15118 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
NPC1O15118 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
NPC1O15118 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
NPC1O15118 HSCB-202ENST00000398941 955 ntTSL 2 BASIC22.05■■□□□ 1.12
NPC1O15118 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC22.05■■□□□ 1.12
NPC1O15118 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
NPC1O15118 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
NPC1O15118 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
NPC1O15118 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
NPC1O15118 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC22.05■■□□□ 1.12
NPC1O15118 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC22.04■■□□□ 1.12
NPC1O15118 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC22.04■■□□□ 1.12
NPC1O15118 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
NPC1O15118 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.04■■□□□ 1.12
NPC1O15118 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
NPC1O15118 AC004854.2-201ENST00000608450 1441 ntBASIC22.04■■□□□ 1.12
NPC1O15118 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
NPC1O15118 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
NPC1O15118 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC22.03■■□□□ 1.12
NPC1O15118 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
NPC1O15118 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
NPC1O15118 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
NPC1O15118 KRT18P11-201ENST00000435214 1283 ntBASIC22.03■■□□□ 1.12
NPC1O15118 AC079140.4-201ENST00000507448 529 ntBASIC22.03■■□□□ 1.12
NPC1O15118 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
NPC1O15118 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
NPC1O15118 KRT18P61-201ENST00000585825 1298 ntBASIC22.03■■□□□ 1.12
NPC1O15118 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
NPC1O15118 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
NPC1O15118 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
NPC1O15118 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
NPC1O15118 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC22.03■■□□□ 1.12
NPC1O15118 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC22.02■■□□□ 1.12
NPC1O15118 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
NPC1O15118 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC22.02■■□□□ 1.12
NPC1O15118 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
NPC1O15118 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
NPC1O15118 TESC-206ENST00000541210 936 ntTSL 3 BASIC22.02■■□□□ 1.12
NPC1O15118 DBI-210ENST00000542275 757 ntTSL 5 BASIC22.02■■□□□ 1.12
NPC1O15118 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC22.02■■□□□ 1.12
NPC1O15118 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
NPC1O15118 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
NPC1O15118 ASL-203ENST00000380839 1765 ntTSL 5 BASIC22.02■■□□□ 1.11
NPC1O15118 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
NPC1O15118 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.11
NPC1O15118 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC22.01■■□□□ 1.11
NPC1O15118 STX7-201ENST00000367937 1090 ntTSL 5 BASIC22.01■■□□□ 1.11
NPC1O15118 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC22.01■■□□□ 1.11
NPC1O15118 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC22.01■■□□□ 1.11
NPC1O15118 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
NPC1O15118 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC22.01■■□□□ 1.11
NPC1O15118 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
NPC1O15118 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
NPC1O15118 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
NPC1O15118 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
NPC1O15118 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC22■■□□□ 1.11
NPC1O15118 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC22■■□□□ 1.11
NPC1O15118 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
NPC1O15118 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
NPC1O15118 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
NPC1O15118 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC22■■□□□ 1.11
NPC1O15118 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC22■■□□□ 1.11
NPC1O15118 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC22■■□□□ 1.11
NPC1O15118 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
NPC1O15118 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC22■■□□□ 1.11
NPC1O15118 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
NPC1O15118 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC22■■□□□ 1.11
NPC1O15118 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC22■■□□□ 1.11
NPC1O15118 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC22■■□□□ 1.11
NPC1O15118 AC080038.1-201ENST00000611274 1154 ntBASIC22■■□□□ 1.11
NPC1O15118 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC22■■□□□ 1.11
NPC1O15118 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC22■■□□□ 1.11
NPC1O15118 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC22■■□□□ 1.11
NPC1O15118 AC005224.4-201ENST00000583262 1652 ntBASIC22■■□□□ 1.11
NPC1O15118 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
NPC1O15118 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
NPC1O15118 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.99■■□□□ 1.11
NPC1O15118 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
NPC1O15118 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms