Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CHKB-CPT1BH3BT56 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
CHKB-CPT1BH3BT56 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CHKB-CPT1BH3BT56 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC12.2□□□□□ -0.46
CHKB-CPT1BH3BT56 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
CHKB-CPT1BH3BT56 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
CHKB-CPT1BH3BT56 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CHKB-CPT1BH3BT56 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CHKB-CPT1BH3BT56 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC12.2□□□□□ -0.46
CHKB-CPT1BH3BT56 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CHKB-CPT1BH3BT56 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CHKB-CPT1BH3BT56 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CHKB-CPT1BH3BT56 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CHKB-CPT1BH3BT56 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CHKB-CPT1BH3BT56 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
CHKB-CPT1BH3BT56 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CHKB-CPT1BH3BT56 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC12.2□□□□□ -0.46
CHKB-CPT1BH3BT56 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CHKB-CPT1BH3BT56 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CHKB-CPT1BH3BT56 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CHKB-CPT1BH3BT56 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CHKB-CPT1BH3BT56 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
CHKB-CPT1BH3BT56 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CHKB-CPT1BH3BT56 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CHKB-CPT1BH3BT56 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
CHKB-CPT1BH3BT56 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CHKB-CPT1BH3BT56 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC12.19□□□□□ -0.46
CHKB-CPT1BH3BT56 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
CHKB-CPT1BH3BT56 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC12.19□□□□□ -0.46
CHKB-CPT1BH3BT56 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CHKB-CPT1BH3BT56 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC12.19□□□□□ -0.46
CHKB-CPT1BH3BT56 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CHKB-CPT1BH3BT56 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
CHKB-CPT1BH3BT56 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC12.19□□□□□ -0.46
CHKB-CPT1BH3BT56 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC12.19□□□□□ -0.46
CHKB-CPT1BH3BT56 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
CHKB-CPT1BH3BT56 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CHKB-CPT1BH3BT56 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC12.19□□□□□ -0.46
CHKB-CPT1BH3BT56 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CHKB-CPT1BH3BT56 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CHKB-CPT1BH3BT56 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CHKB-CPT1BH3BT56 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
CHKB-CPT1BH3BT56 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CHKB-CPT1BH3BT56 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CHKB-CPT1BH3BT56 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
CHKB-CPT1BH3BT56 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CHKB-CPT1BH3BT56 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC12.18□□□□□ -0.46
CHKB-CPT1BH3BT56 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CHKB-CPT1BH3BT56 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CHKB-CPT1BH3BT56 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CHKB-CPT1BH3BT56 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
CHKB-CPT1BH3BT56 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CHKB-CPT1BH3BT56 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CHKB-CPT1BH3BT56 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CHKB-CPT1BH3BT56 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CHKB-CPT1BH3BT56 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CHKB-CPT1BH3BT56 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
CHKB-CPT1BH3BT56 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
CHKB-CPT1BH3BT56 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CHKB-CPT1BH3BT56 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC12.18□□□□□ -0.46
CHKB-CPT1BH3BT56 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC12.18□□□□□ -0.46
CHKB-CPT1BH3BT56 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
CHKB-CPT1BH3BT56 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CHKB-CPT1BH3BT56 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CHKB-CPT1BH3BT56 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CHKB-CPT1BH3BT56 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CHKB-CPT1BH3BT56 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
CHKB-CPT1BH3BT56 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CHKB-CPT1BH3BT56 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CHKB-CPT1BH3BT56 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CHKB-CPT1BH3BT56 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CHKB-CPT1BH3BT56 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
CHKB-CPT1BH3BT56 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CHKB-CPT1BH3BT56 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CHKB-CPT1BH3BT56 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CHKB-CPT1BH3BT56 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
CHKB-CPT1BH3BT56 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CHKB-CPT1BH3BT56 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CHKB-CPT1BH3BT56 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
CHKB-CPT1BH3BT56 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC12.17□□□□□ -0.46
CHKB-CPT1BH3BT56 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CHKB-CPT1BH3BT56 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC12.17□□□□□ -0.46
CHKB-CPT1BH3BT56 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
CHKB-CPT1BH3BT56 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CHKB-CPT1BH3BT56 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC12.17□□□□□ -0.46
CHKB-CPT1BH3BT56 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CHKB-CPT1BH3BT56 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CHKB-CPT1BH3BT56 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CHKB-CPT1BH3BT56 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
CHKB-CPT1BH3BT56 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CHKB-CPT1BH3BT56 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC12.16□□□□□ -0.46
CHKB-CPT1BH3BT56 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CHKB-CPT1BH3BT56 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CHKB-CPT1BH3BT56 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CHKB-CPT1BH3BT56 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
CHKB-CPT1BH3BT56 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC12.16□□□□□ -0.46
CHKB-CPT1BH3BT56 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CHKB-CPT1BH3BT56 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
CHKB-CPT1BH3BT56 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CHKB-CPT1BH3BT56 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms