Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
TMEM88BA6NKF7 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC25.75■■□□□ 1.71
TMEM88BA6NKF7 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC25.75■■□□□ 1.71
TMEM88BA6NKF7 AC068338.2-201ENST00000563278 1430 ntBASIC25.75■■□□□ 1.71
TMEM88BA6NKF7 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
TMEM88BA6NKF7 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC25.75■■□□□ 1.71
TMEM88BA6NKF7 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
TMEM88BA6NKF7 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC25.75■■□□□ 1.71
TMEM88BA6NKF7 AC097658.1-201ENST00000475555 843 ntBASIC25.75■■□□□ 1.71
TMEM88BA6NKF7 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC25.75■■□□□ 1.71
TMEM88BA6NKF7 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
TMEM88BA6NKF7 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC25.75■■□□□ 1.71
TMEM88BA6NKF7 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC25.75■■□□□ 1.71
TMEM88BA6NKF7 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC25.74■■□□□ 1.71
TMEM88BA6NKF7 AC092803.2-201ENST00000564287 1899 ntBASIC25.74■■□□□ 1.71
TMEM88BA6NKF7 OXCT2P1-201ENST00000447263 1535 ntBASIC25.74■■□□□ 1.71
TMEM88BA6NKF7 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC25.74■■□□□ 1.71
TMEM88BA6NKF7 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
TMEM88BA6NKF7 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
TMEM88BA6NKF7 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
TMEM88BA6NKF7 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
TMEM88BA6NKF7 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
TMEM88BA6NKF7 OR10C1-204ENST00000622521 1039 ntBASIC25.74■■□□□ 1.71
TMEM88BA6NKF7 MYC-209ENST00000641252 345 ntBASIC25.74■■□□□ 1.71
TMEM88BA6NKF7 AC009237.3-201ENST00000393279 1427 ntBASIC25.73■■□□□ 1.71
TMEM88BA6NKF7 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
TMEM88BA6NKF7 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC25.73■■□□□ 1.71
TMEM88BA6NKF7 PEX7-202ENST00000367756 680 ntTSL 3 BASIC25.73■■□□□ 1.71
TMEM88BA6NKF7 BMP1-204ENST00000397814 836 ntTSL 4 BASIC25.73■■□□□ 1.71
TMEM88BA6NKF7 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
TMEM88BA6NKF7 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
TMEM88BA6NKF7 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC25.73■■□□□ 1.71
TMEM88BA6NKF7 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC25.73■■□□□ 1.71
TMEM88BA6NKF7 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC25.73■■□□□ 1.71
TMEM88BA6NKF7 PKM-203ENST00000389093 2279 ntTSL 5 BASIC25.72■■□□□ 1.71
TMEM88BA6NKF7 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC25.72■■□□□ 1.71
TMEM88BA6NKF7 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
TMEM88BA6NKF7 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
TMEM88BA6NKF7 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC25.72■■□□□ 1.71
TMEM88BA6NKF7 MME-217ENST00000616757 1315 ntTSL 5 BASIC25.72■■□□□ 1.71
TMEM88BA6NKF7 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
TMEM88BA6NKF7 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
TMEM88BA6NKF7 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
TMEM88BA6NKF7 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC25.72■■□□□ 1.71
TMEM88BA6NKF7 UBE2SP1-201ENST00000450587 669 ntBASIC25.72■■□□□ 1.71
TMEM88BA6NKF7 SERP1-208ENST00000491660 830 ntTSL 2 BASIC25.72■■□□□ 1.71
TMEM88BA6NKF7 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
TMEM88BA6NKF7 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
TMEM88BA6NKF7 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC25.71■■□□□ 1.71
TMEM88BA6NKF7 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC25.71■■□□□ 1.71
TMEM88BA6NKF7 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
TMEM88BA6NKF7 GXYLT1P3-201ENST00000453058 1193 ntBASIC25.71■■□□□ 1.71
TMEM88BA6NKF7 KRT18P20-201ENST00000548986 1279 ntBASIC25.71■■□□□ 1.71
TMEM88BA6NKF7 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC25.71■■□□□ 1.71
TMEM88BA6NKF7 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC25.71■■□□□ 1.71
TMEM88BA6NKF7 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC25.71■■□□□ 1.71
TMEM88BA6NKF7 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
TMEM88BA6NKF7 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC25.7■■□□□ 1.71
TMEM88BA6NKF7 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC25.7■■□□□ 1.71
TMEM88BA6NKF7 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
TMEM88BA6NKF7 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC25.7■■□□□ 1.7
TMEM88BA6NKF7 AC211429.1-201ENST00000415277 523 ntBASIC25.7■■□□□ 1.7
TMEM88BA6NKF7 AL512625.2-201ENST00000417533 625 ntBASIC25.7■■□□□ 1.7
TMEM88BA6NKF7 BX276092.2-201ENST00000417668 665 ntBASIC25.7■■□□□ 1.7
TMEM88BA6NKF7 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC25.7■■□□□ 1.7
TMEM88BA6NKF7 RHOD-202ENST00000532559 538 ntTSL 3 BASIC25.7■■□□□ 1.7
TMEM88BA6NKF7 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC25.7■■□□□ 1.7
TMEM88BA6NKF7 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
TMEM88BA6NKF7 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
TMEM88BA6NKF7 TMEM202-AS1-202ENST00000565181 2325 ntBASIC25.7■■□□□ 1.7
TMEM88BA6NKF7 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC25.69■■□□□ 1.7
TMEM88BA6NKF7 UQCRFS1P1-201ENST00000435169 820 ntBASIC25.69■■□□□ 1.7
TMEM88BA6NKF7 AC093787.1-201ENST00000450396 207 ntBASIC25.69■■□□□ 1.7
TMEM88BA6NKF7 TERF1P5-201ENST00000477545 1207 ntBASIC25.69■■□□□ 1.7
TMEM88BA6NKF7 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC25.69■■□□□ 1.7
TMEM88BA6NKF7 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC25.69■■□□□ 1.7
TMEM88BA6NKF7 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
TMEM88BA6NKF7 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
TMEM88BA6NKF7 CEBPA-AS1-201ENST00000592982 2198 ntBASIC25.69■■□□□ 1.7
TMEM88BA6NKF7 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
TMEM88BA6NKF7 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
TMEM88BA6NKF7 SHF-206ENST00000560471 2499 ntTSL 5 BASIC25.69■■□□□ 1.7
TMEM88BA6NKF7 MFF-207ENST00000409565 1548 ntTSL 2 BASIC25.68■■□□□ 1.7
TMEM88BA6NKF7 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC25.68■■□□□ 1.7
TMEM88BA6NKF7 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
TMEM88BA6NKF7 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
TMEM88BA6NKF7 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
TMEM88BA6NKF7 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
TMEM88BA6NKF7 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC25.68■■□□□ 1.7
TMEM88BA6NKF7 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC25.68■■□□□ 1.7
TMEM88BA6NKF7 AC073648.6-201ENST00000641589 218 ntBASIC25.68■■□□□ 1.7
TMEM88BA6NKF7 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC25.68■■□□□ 1.7
TMEM88BA6NKF7 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC25.68■■□□□ 1.7
TMEM88BA6NKF7 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC25.68■■□□□ 1.7
TMEM88BA6NKF7 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
TMEM88BA6NKF7 AC004687.1-201ENST00000579003 1625 ntBASIC25.67■■□□□ 1.7
TMEM88BA6NKF7 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
TMEM88BA6NKF7 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
TMEM88BA6NKF7 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC25.67■■□□□ 1.7
TMEM88BA6NKF7 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms