Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.18■□□□□ 0.34
RBFOX3A6NFN3 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
RBFOX3A6NFN3 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.18■□□□□ 0.34
RBFOX3A6NFN3 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RBFOX3A6NFN3 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RBFOX3A6NFN3 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RBFOX3A6NFN3 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RBFOX3A6NFN3 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RBFOX3A6NFN3 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RBFOX3A6NFN3 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RBFOX3A6NFN3 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RBFOX3A6NFN3 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RBFOX3A6NFN3 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RBFOX3A6NFN3 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RBFOX3A6NFN3 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RBFOX3A6NFN3 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.17■□□□□ 0.34
RBFOX3A6NFN3 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RBFOX3A6NFN3 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.17■□□□□ 0.34
RBFOX3A6NFN3 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
RBFOX3A6NFN3 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RBFOX3A6NFN3 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC17.16■□□□□ 0.34
RBFOX3A6NFN3 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RBFOX3A6NFN3 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RBFOX3A6NFN3 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC17.16■□□□□ 0.34
RBFOX3A6NFN3 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
RBFOX3A6NFN3 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RBFOX3A6NFN3 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RBFOX3A6NFN3 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RBFOX3A6NFN3 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.16■□□□□ 0.34
RBFOX3A6NFN3 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.16■□□□□ 0.34
RBFOX3A6NFN3 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RBFOX3A6NFN3 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RBFOX3A6NFN3 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RBFOX3A6NFN3 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC17.15■□□□□ 0.34
RBFOX3A6NFN3 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RBFOX3A6NFN3 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RBFOX3A6NFN3 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC17.15■□□□□ 0.34
RBFOX3A6NFN3 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.15■□□□□ 0.34
RBFOX3A6NFN3 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RBFOX3A6NFN3 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.15■□□□□ 0.34
RBFOX3A6NFN3 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RBFOX3A6NFN3 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RBFOX3A6NFN3 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
RBFOX3A6NFN3 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RBFOX3A6NFN3 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RBFOX3A6NFN3 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RBFOX3A6NFN3 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RBFOX3A6NFN3 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RBFOX3A6NFN3 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RBFOX3A6NFN3 MIR7108-201ENST00000614319 87 ntBASIC17.14■□□□□ 0.33
RBFOX3A6NFN3 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RBFOX3A6NFN3 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.14■□□□□ 0.33
RBFOX3A6NFN3 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RBFOX3A6NFN3 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
RBFOX3A6NFN3 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RBFOX3A6NFN3 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
RBFOX3A6NFN3 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RBFOX3A6NFN3 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
RBFOX3A6NFN3 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RBFOX3A6NFN3 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RBFOX3A6NFN3 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RBFOX3A6NFN3 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.13■□□□□ 0.33
RBFOX3A6NFN3 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.13■□□□□ 0.33
RBFOX3A6NFN3 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RBFOX3A6NFN3 ZNRF2P2-203ENST00000454624 420 ntBASIC17.13■□□□□ 0.33
RBFOX3A6NFN3 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC17.13■□□□□ 0.33
RBFOX3A6NFN3 MOB2-207ENST00000614710 705 ntTSL 5 BASIC17.13■□□□□ 0.33
RBFOX3A6NFN3 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RBFOX3A6NFN3 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.13■□□□□ 0.33
RBFOX3A6NFN3 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RBFOX3A6NFN3 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RBFOX3A6NFN3 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RBFOX3A6NFN3 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
RBFOX3A6NFN3 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RBFOX3A6NFN3 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
RBFOX3A6NFN3 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RBFOX3A6NFN3 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.12■□□□□ 0.33
RBFOX3A6NFN3 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RBFOX3A6NFN3 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC17.12■□□□□ 0.33
RBFOX3A6NFN3 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RBFOX3A6NFN3 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RBFOX3A6NFN3 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
RBFOX3A6NFN3 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RBFOX3A6NFN3 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
RBFOX3A6NFN3 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RBFOX3A6NFN3 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RBFOX3A6NFN3 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RBFOX3A6NFN3 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RBFOX3A6NFN3 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RBFOX3A6NFN3 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RBFOX3A6NFN3 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RBFOX3A6NFN3 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.11■□□□□ 0.33
RBFOX3A6NFN3 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RBFOX3A6NFN3 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RBFOX3A6NFN3 STK32C-205ENST00000456004 607 ntTSL 2 BASIC17.11■□□□□ 0.33
RBFOX3A6NFN3 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RBFOX3A6NFN3 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RBFOX3A6NFN3 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RBFOX3A6NFN3 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.11■□□□□ 0.33
RBFOX3A6NFN3 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms