Protein–RNA interactions for Protein: A4FU49

SH3D21, SH3 domain-containing protein 21, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21A4FU49 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SH3D21A4FU49 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SH3D21A4FU49 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SH3D21A4FU49 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.12■□□□□ 0.81
SH3D21A4FU49 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SH3D21A4FU49 AC080038.3-201ENST00000623346 1952 ntBASIC20.12■□□□□ 0.81
SH3D21A4FU49 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SH3D21A4FU49 AL136162.1-201ENST00000607711 1078 ntBASIC20.12■□□□□ 0.81
SH3D21A4FU49 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
SH3D21A4FU49 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SH3D21A4FU49 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SH3D21A4FU49 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
SH3D21A4FU49 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SH3D21A4FU49 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SH3D21A4FU49 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SH3D21A4FU49 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.12■□□□□ 0.81
SH3D21A4FU49 AL353803.4-201ENST00000565882 1934 ntBASIC20.12■□□□□ 0.81
SH3D21A4FU49 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SH3D21A4FU49 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SH3D21A4FU49 AC142381.2-201ENST00000566120 298 ntBASIC20.11■□□□□ 0.81
SH3D21A4FU49 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SH3D21A4FU49 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SH3D21A4FU49 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.1■□□□□ 0.81
SH3D21A4FU49 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SH3D21A4FU49 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SH3D21A4FU49 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
SH3D21A4FU49 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
SH3D21A4FU49 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
SH3D21A4FU49 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.1■□□□□ 0.81
SH3D21A4FU49 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.1■□□□□ 0.81
SH3D21A4FU49 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.1■□□□□ 0.81
SH3D21A4FU49 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
SH3D21A4FU49 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SH3D21A4FU49 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SH3D21A4FU49 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.09■□□□□ 0.81
SH3D21A4FU49 AC135279.3-201ENST00000610945 1311 ntBASIC20.09■□□□□ 0.81
SH3D21A4FU49 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SH3D21A4FU49 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.09■□□□□ 0.81
SH3D21A4FU49 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.09■□□□□ 0.81
SH3D21A4FU49 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.09■□□□□ 0.81
SH3D21A4FU49 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SH3D21A4FU49 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.09■□□□□ 0.81
SH3D21A4FU49 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
SH3D21A4FU49 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
SH3D21A4FU49 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SH3D21A4FU49 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SH3D21A4FU49 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SH3D21A4FU49 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SH3D21A4FU49 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SH3D21A4FU49 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
SH3D21A4FU49 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.08■□□□□ 0.81
SH3D21A4FU49 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SH3D21A4FU49 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SH3D21A4FU49 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SH3D21A4FU49 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.08■□□□□ 0.81
SH3D21A4FU49 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SH3D21A4FU49 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.08■□□□□ 0.81
SH3D21A4FU49 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SH3D21A4FU49 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SH3D21A4FU49 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.08■□□□□ 0.81
SH3D21A4FU49 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
SH3D21A4FU49 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.08■□□□□ 0.81
SH3D21A4FU49 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SH3D21A4FU49 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
SH3D21A4FU49 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
SH3D21A4FU49 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
SH3D21A4FU49 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SH3D21A4FU49 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SH3D21A4FU49 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SH3D21A4FU49 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SH3D21A4FU49 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SH3D21A4FU49 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SH3D21A4FU49 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SH3D21A4FU49 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SH3D21A4FU49 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
SH3D21A4FU49 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SH3D21A4FU49 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.07■□□□□ 0.8
SH3D21A4FU49 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SH3D21A4FU49 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SH3D21A4FU49 AC087742.1-201ENST00000575880 1738 ntBASIC20.07■□□□□ 0.8
SH3D21A4FU49 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.07■□□□□ 0.8
SH3D21A4FU49 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.07■□□□□ 0.8
SH3D21A4FU49 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SH3D21A4FU49 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.07■□□□□ 0.8
SH3D21A4FU49 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SH3D21A4FU49 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.06■□□□□ 0.8
SH3D21A4FU49 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.06■□□□□ 0.8
SH3D21A4FU49 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SH3D21A4FU49 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SH3D21A4FU49 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.06■□□□□ 0.8
SH3D21A4FU49 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SH3D21A4FU49 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SH3D21A4FU49 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.06■□□□□ 0.8
SH3D21A4FU49 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SH3D21A4FU49 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
SH3D21A4FU49 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.06■□□□□ 0.8
SH3D21A4FU49 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.06■□□□□ 0.8
SH3D21A4FU49 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SH3D21A4FU49 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SH3D21A4FU49 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms