Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
TRBV5-4A0A0C4DH59 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRBV5-4A0A0C4DH59 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.54■■□□□ 1.04
TRBV5-4A0A0C4DH59 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.54■■□□□ 1.04
TRBV5-4A0A0C4DH59 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TRBV5-4A0A0C4DH59 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRBV5-4A0A0C4DH59 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.54■■□□□ 1.04
TRBV5-4A0A0C4DH59 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.54■■□□□ 1.04
TRBV5-4A0A0C4DH59 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TRBV5-4A0A0C4DH59 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRBV5-4A0A0C4DH59 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRBV5-4A0A0C4DH59 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRBV5-4A0A0C4DH59 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRBV5-4A0A0C4DH59 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.53■■□□□ 1.04
TRBV5-4A0A0C4DH59 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRBV5-4A0A0C4DH59 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.53■■□□□ 1.04
TRBV5-4A0A0C4DH59 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRBV5-4A0A0C4DH59 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRBV5-4A0A0C4DH59 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.53■■□□□ 1.04
TRBV5-4A0A0C4DH59 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRBV5-4A0A0C4DH59 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.53■■□□□ 1.04
TRBV5-4A0A0C4DH59 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRBV5-4A0A0C4DH59 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRBV5-4A0A0C4DH59 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.53■■□□□ 1.04
TRBV5-4A0A0C4DH59 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
TRBV5-4A0A0C4DH59 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRBV5-4A0A0C4DH59 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRBV5-4A0A0C4DH59 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.52■■□□□ 1.04
TRBV5-4A0A0C4DH59 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.52■■□□□ 1.04
TRBV5-4A0A0C4DH59 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.52■■□□□ 1.04
TRBV5-4A0A0C4DH59 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TRBV5-4A0A0C4DH59 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TRBV5-4A0A0C4DH59 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRBV5-4A0A0C4DH59 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
TRBV5-4A0A0C4DH59 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.03
TRBV5-4A0A0C4DH59 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRBV5-4A0A0C4DH59 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TRBV5-4A0A0C4DH59 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TRBV5-4A0A0C4DH59 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TRBV5-4A0A0C4DH59 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRBV5-4A0A0C4DH59 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
TRBV5-4A0A0C4DH59 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRBV5-4A0A0C4DH59 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRBV5-4A0A0C4DH59 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.51■■□□□ 1.03
TRBV5-4A0A0C4DH59 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.51■■□□□ 1.03
TRBV5-4A0A0C4DH59 AC142381.2-201ENST00000566120 298 ntBASIC21.51■■□□□ 1.03
TRBV5-4A0A0C4DH59 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRBV5-4A0A0C4DH59 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
TRBV5-4A0A0C4DH59 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRBV5-4A0A0C4DH59 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRBV5-4A0A0C4DH59 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRBV5-4A0A0C4DH59 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
TRBV5-4A0A0C4DH59 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TRBV5-4A0A0C4DH59 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.5■■□□□ 1.03
TRBV5-4A0A0C4DH59 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.5■■□□□ 1.03
TRBV5-4A0A0C4DH59 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.5■■□□□ 1.03
TRBV5-4A0A0C4DH59 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TRBV5-4A0A0C4DH59 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.5■■□□□ 1.03
TRBV5-4A0A0C4DH59 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
TRBV5-4A0A0C4DH59 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRBV5-4A0A0C4DH59 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TRBV5-4A0A0C4DH59 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.49■■□□□ 1.03
TRBV5-4A0A0C4DH59 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.49■■□□□ 1.03
TRBV5-4A0A0C4DH59 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRBV5-4A0A0C4DH59 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TRBV5-4A0A0C4DH59 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TRBV5-4A0A0C4DH59 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
TRBV5-4A0A0C4DH59 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TRBV5-4A0A0C4DH59 AC092053.2-201ENST00000640557 1818 ntBASIC21.49■■□□□ 1.03
TRBV5-4A0A0C4DH59 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.49■■□□□ 1.03
TRBV5-4A0A0C4DH59 TSPY26P-201ENST00000476365 1326 ntBASIC21.49■■□□□ 1.03
TRBV5-4A0A0C4DH59 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRBV5-4A0A0C4DH59 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TRBV5-4A0A0C4DH59 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRBV5-4A0A0C4DH59 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.49■■□□□ 1.03
TRBV5-4A0A0C4DH59 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.48■■□□□ 1.03
TRBV5-4A0A0C4DH59 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRBV5-4A0A0C4DH59 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRBV5-4A0A0C4DH59 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
TRBV5-4A0A0C4DH59 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRBV5-4A0A0C4DH59 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRBV5-4A0A0C4DH59 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRBV5-4A0A0C4DH59 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
TRBV5-4A0A0C4DH59 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.48■■□□□ 1.03
TRBV5-4A0A0C4DH59 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRBV5-4A0A0C4DH59 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.48■■□□□ 1.03
TRBV5-4A0A0C4DH59 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.48■■□□□ 1.03
TRBV5-4A0A0C4DH59 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRBV5-4A0A0C4DH59 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TRBV5-4A0A0C4DH59 OR7E47P-201ENST00000546390 1422 ntBASIC21.47■■□□□ 1.03
TRBV5-4A0A0C4DH59 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TRBV5-4A0A0C4DH59 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.47■■□□□ 1.03
TRBV5-4A0A0C4DH59 EP400NL-214ENST00000641289 2402 ntBASIC21.47■■□□□ 1.03
TRBV5-4A0A0C4DH59 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRBV5-4A0A0C4DH59 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRBV5-4A0A0C4DH59 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRBV5-4A0A0C4DH59 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.47■■□□□ 1.03
TRBV5-4A0A0C4DH59 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
TRBV5-4A0A0C4DH59 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRBV5-4A0A0C4DH59 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms