Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC15.63■□□□□ 0.09
TRAV4A0A0B4J268 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV4A0A0B4J268 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV4A0A0B4J268 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV4A0A0B4J268 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV4A0A0B4J268 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV4A0A0B4J268 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV4A0A0B4J268 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV4A0A0B4J268 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC15.62■□□□□ 0.09
TRAV4A0A0B4J268 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV4A0A0B4J268 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV4A0A0B4J268 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC15.62■□□□□ 0.09
TRAV4A0A0B4J268 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV4A0A0B4J268 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV4A0A0B4J268 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV4A0A0B4J268 AC092053.2-201ENST00000640557 1818 ntBASIC15.62■□□□□ 0.09
TRAV4A0A0B4J268 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV4A0A0B4J268 AL356441.2-201ENST00000443009 864 ntBASIC15.62■□□□□ 0.09
TRAV4A0A0B4J268 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC15.62■□□□□ 0.09
TRAV4A0A0B4J268 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
TRAV4A0A0B4J268 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC15.62■□□□□ 0.09
TRAV4A0A0B4J268 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV4A0A0B4J268 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV4A0A0B4J268 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC15.62■□□□□ 0.09
TRAV4A0A0B4J268 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC15.61■□□□□ 0.09
TRAV4A0A0B4J268 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC15.61■□□□□ 0.09
TRAV4A0A0B4J268 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
TRAV4A0A0B4J268 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV4A0A0B4J268 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
TRAV4A0A0B4J268 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TRAV4A0A0B4J268 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV4A0A0B4J268 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV4A0A0B4J268 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC15.61■□□□□ 0.09
TRAV4A0A0B4J268 AC099791.2-201ENST00000605725 427 ntBASIC15.61■□□□□ 0.09
TRAV4A0A0B4J268 pRNA.6-201ENST00000610482 90 ntBASIC15.61■□□□□ 0.09
TRAV4A0A0B4J268 pRNA.5-201ENST00000612139 90 ntBASIC15.61■□□□□ 0.09
TRAV4A0A0B4J268 pRNA.11-201ENST00000618423 90 ntBASIC15.61■□□□□ 0.09
TRAV4A0A0B4J268 pRNA.13-201ENST00000619112 90 ntBASIC15.61■□□□□ 0.09
TRAV4A0A0B4J268 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV4A0A0B4J268 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV4A0A0B4J268 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC15.61■□□□□ 0.09
TRAV4A0A0B4J268 AC133637.1-201ENST00000624115 1537 ntBASIC15.61■□□□□ 0.09
TRAV4A0A0B4J268 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV4A0A0B4J268 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC15.61■□□□□ 0.09
TRAV4A0A0B4J268 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV4A0A0B4J268 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV4A0A0B4J268 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC15.61■□□□□ 0.09
TRAV4A0A0B4J268 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV4A0A0B4J268 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV4A0A0B4J268 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
TRAV4A0A0B4J268 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV4A0A0B4J268 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
TRAV4A0A0B4J268 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC15.6■□□□□ 0.09
TRAV4A0A0B4J268 AC139530.1-201ENST00000575312 1977 ntBASIC15.6■□□□□ 0.09
TRAV4A0A0B4J268 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TRAV4A0A0B4J268 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV4A0A0B4J268 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV4A0A0B4J268 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
TRAV4A0A0B4J268 GTSE1-AS1-202ENST00000623117 1518 ntBASIC15.6■□□□□ 0.09
TRAV4A0A0B4J268 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TRAV4A0A0B4J268 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC15.6■□□□□ 0.09
TRAV4A0A0B4J268 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC15.6■□□□□ 0.09
TRAV4A0A0B4J268 SRR-208ENST00000576848 588 ntTSL 4 BASIC15.6■□□□□ 0.09
TRAV4A0A0B4J268 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
TRAV4A0A0B4J268 AC080038.3-201ENST00000623346 1952 ntBASIC15.6■□□□□ 0.09
TRAV4A0A0B4J268 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV4A0A0B4J268 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV4A0A0B4J268 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV4A0A0B4J268 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV4A0A0B4J268 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV4A0A0B4J268 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV4A0A0B4J268 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV4A0A0B4J268 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV4A0A0B4J268 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAV4A0A0B4J268 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC15.59■□□□□ 0.09
TRAV4A0A0B4J268 AC006455.2-201ENST00000429931 906 ntBASIC15.59■□□□□ 0.09
TRAV4A0A0B4J268 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV4A0A0B4J268 CA15P2-201ENST00000611168 834 ntBASIC15.59■□□□□ 0.09
TRAV4A0A0B4J268 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV4A0A0B4J268 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAV4A0A0B4J268 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAV4A0A0B4J268 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAV4A0A0B4J268 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
TRAV4A0A0B4J268 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
TRAV4A0A0B4J268 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV4A0A0B4J268 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC15.58■□□□□ 0.08
TRAV4A0A0B4J268 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV4A0A0B4J268 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV4A0A0B4J268 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV4A0A0B4J268 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC15.58■□□□□ 0.08
TRAV4A0A0B4J268 AL512631.2-201ENST00000604634 923 ntBASIC15.58■□□□□ 0.08
TRAV4A0A0B4J268 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
TRAV4A0A0B4J268 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC15.58■□□□□ 0.08
TRAV4A0A0B4J268 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV4A0A0B4J268 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV4A0A0B4J268 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC15.58■□□□□ 0.08
TRAV4A0A0B4J268 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV4A0A0B4J268 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV4A0A0B4J268 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV4A0A0B4J268 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms