Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC15.91■□□□□ 0.14
TRAV8-6A0A0B4J262 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV8-6A0A0B4J262 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
TRAV8-6A0A0B4J262 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV8-6A0A0B4J262 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC15.91■□□□□ 0.14
TRAV8-6A0A0B4J262 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV8-6A0A0B4J262 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV8-6A0A0B4J262 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
TRAV8-6A0A0B4J262 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
TRAV8-6A0A0B4J262 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV8-6A0A0B4J262 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRAV8-6A0A0B4J262 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV8-6A0A0B4J262 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV8-6A0A0B4J262 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV8-6A0A0B4J262 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC15.9■□□□□ 0.14
TRAV8-6A0A0B4J262 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV8-6A0A0B4J262 RARRES2P1-201ENST00000474487 481 ntBASIC15.9■□□□□ 0.14
TRAV8-6A0A0B4J262 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC15.9■□□□□ 0.14
TRAV8-6A0A0B4J262 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV8-6A0A0B4J262 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV8-6A0A0B4J262 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC15.9■□□□□ 0.14
TRAV8-6A0A0B4J262 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC15.9■□□□□ 0.14
TRAV8-6A0A0B4J262 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
TRAV8-6A0A0B4J262 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC15.9■□□□□ 0.14
TRAV8-6A0A0B4J262 AL161729.1-201ENST00000604104 1402 ntBASIC15.9■□□□□ 0.14
TRAV8-6A0A0B4J262 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV8-6A0A0B4J262 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV8-6A0A0B4J262 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC15.9■□□□□ 0.14
TRAV8-6A0A0B4J262 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV8-6A0A0B4J262 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV8-6A0A0B4J262 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV8-6A0A0B4J262 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
TRAV8-6A0A0B4J262 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
TRAV8-6A0A0B4J262 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
TRAV8-6A0A0B4J262 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV8-6A0A0B4J262 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.14
TRAV8-6A0A0B4J262 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV8-6A0A0B4J262 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
TRAV8-6A0A0B4J262 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV8-6A0A0B4J262 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC15.89■□□□□ 0.13
TRAV8-6A0A0B4J262 BX664725.1-201ENST00000438252 379 ntBASIC15.89■□□□□ 0.13
TRAV8-6A0A0B4J262 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV8-6A0A0B4J262 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV8-6A0A0B4J262 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV8-6A0A0B4J262 AL022069.1-201ENST00000568025 1636 ntBASIC15.89■□□□□ 0.13
TRAV8-6A0A0B4J262 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV8-6A0A0B4J262 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV8-6A0A0B4J262 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV8-6A0A0B4J262 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV8-6A0A0B4J262 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV8-6A0A0B4J262 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV8-6A0A0B4J262 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC15.88■□□□□ 0.13
TRAV8-6A0A0B4J262 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
TRAV8-6A0A0B4J262 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC15.88■□□□□ 0.13
TRAV8-6A0A0B4J262 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV8-6A0A0B4J262 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAV8-6A0A0B4J262 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC15.88■□□□□ 0.13
TRAV8-6A0A0B4J262 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC15.88■□□□□ 0.13
TRAV8-6A0A0B4J262 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV8-6A0A0B4J262 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV8-6A0A0B4J262 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV8-6A0A0B4J262 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
TRAV8-6A0A0B4J262 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
TRAV8-6A0A0B4J262 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV8-6A0A0B4J262 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV8-6A0A0B4J262 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAV8-6A0A0B4J262 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV8-6A0A0B4J262 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV8-6A0A0B4J262 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV8-6A0A0B4J262 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV8-6A0A0B4J262 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV8-6A0A0B4J262 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAV8-6A0A0B4J262 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV8-6A0A0B4J262 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV8-6A0A0B4J262 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV8-6A0A0B4J262 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV8-6A0A0B4J262 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV8-6A0A0B4J262 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV8-6A0A0B4J262 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TRAV8-6A0A0B4J262 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC15.87■□□□□ 0.13
TRAV8-6A0A0B4J262 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV8-6A0A0B4J262 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV8-6A0A0B4J262 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV8-6A0A0B4J262 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV8-6A0A0B4J262 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.13
TRAV8-6A0A0B4J262 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV8-6A0A0B4J262 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV8-6A0A0B4J262 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV8-6A0A0B4J262 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC15.86■□□□□ 0.13
TRAV8-6A0A0B4J262 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV8-6A0A0B4J262 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC15.86■□□□□ 0.13
TRAV8-6A0A0B4J262 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
TRAV8-6A0A0B4J262 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC15.86■□□□□ 0.13
TRAV8-6A0A0B4J262 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV8-6A0A0B4J262 KRT125P-201ENST00000546827 989 ntBASIC15.86■□□□□ 0.13
TRAV8-6A0A0B4J262 LSM7-203ENST00000585409 512 ntTSL 2 BASIC15.86■□□□□ 0.13
TRAV8-6A0A0B4J262 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC15.86■□□□□ 0.13
TRAV8-6A0A0B4J262 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV8-6A0A0B4J262 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC15.86■□□□□ 0.13
TRAV8-6A0A0B4J262 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms