Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV10A0A0B4J240 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV10A0A0B4J240 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC15.37■□□□□ 0.05
TRAV10A0A0B4J240 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV10A0A0B4J240 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC15.37■□□□□ 0.05
TRAV10A0A0B4J240 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV10A0A0B4J240 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
TRAV10A0A0B4J240 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC15.36■□□□□ 0.05
TRAV10A0A0B4J240 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
TRAV10A0A0B4J240 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
TRAV10A0A0B4J240 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV10A0A0B4J240 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV10A0A0B4J240 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC15.36■□□□□ 0.05
TRAV10A0A0B4J240 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC15.36■□□□□ 0.05
TRAV10A0A0B4J240 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV10A0A0B4J240 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV10A0A0B4J240 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC15.36■□□□□ 0.05
TRAV10A0A0B4J240 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV10A0A0B4J240 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC15.36■□□□□ 0.05
TRAV10A0A0B4J240 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC15.36■□□□□ 0.05
TRAV10A0A0B4J240 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC15.36■□□□□ 0.05
TRAV10A0A0B4J240 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
TRAV10A0A0B4J240 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC15.36■□□□□ 0.05
TRAV10A0A0B4J240 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC15.36■□□□□ 0.05
TRAV10A0A0B4J240 AC092068.2-201ENST00000590491 1708 ntBASIC15.36■□□□□ 0.05
TRAV10A0A0B4J240 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV10A0A0B4J240 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV10A0A0B4J240 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
TRAV10A0A0B4J240 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV10A0A0B4J240 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV10A0A0B4J240 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
TRAV10A0A0B4J240 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV10A0A0B4J240 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV10A0A0B4J240 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV10A0A0B4J240 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
TRAV10A0A0B4J240 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
TRAV10A0A0B4J240 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
TRAV10A0A0B4J240 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV10A0A0B4J240 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC15.35■□□□□ 0.05
TRAV10A0A0B4J240 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC15.35■□□□□ 0.05
TRAV10A0A0B4J240 SMUG1P1-201ENST00000590640 811 ntBASIC15.35■□□□□ 0.05
TRAV10A0A0B4J240 TPRG1LP1-201ENST00000598702 760 ntBASIC15.35■□□□□ 0.05
TRAV10A0A0B4J240 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAV10A0A0B4J240 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV10A0A0B4J240 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV10A0A0B4J240 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV10A0A0B4J240 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV10A0A0B4J240 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
TRAV10A0A0B4J240 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV10A0A0B4J240 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC15.34■□□□□ 0.05
TRAV10A0A0B4J240 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV10A0A0B4J240 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC15.34■□□□□ 0.05
TRAV10A0A0B4J240 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
TRAV10A0A0B4J240 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC15.34■□□□□ 0.05
TRAV10A0A0B4J240 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC15.34■□□□□ 0.05
TRAV10A0A0B4J240 IKBKGP1-201ENST00000612193 1073 ntBASIC15.34■□□□□ 0.05
TRAV10A0A0B4J240 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC15.34■□□□□ 0.05
TRAV10A0A0B4J240 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV10A0A0B4J240 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC15.34■□□□□ 0.05
TRAV10A0A0B4J240 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV10A0A0B4J240 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRAV10A0A0B4J240 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC15.33■□□□□ 0.05
TRAV10A0A0B4J240 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV10A0A0B4J240 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV10A0A0B4J240 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV10A0A0B4J240 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV10A0A0B4J240 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV10A0A0B4J240 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV10A0A0B4J240 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV10A0A0B4J240 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC15.33■□□□□ 0.04
TRAV10A0A0B4J240 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC15.33■□□□□ 0.04
TRAV10A0A0B4J240 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC15.33■□□□□ 0.04
TRAV10A0A0B4J240 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV10A0A0B4J240 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV10A0A0B4J240 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC15.33■□□□□ 0.04
TRAV10A0A0B4J240 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
TRAV10A0A0B4J240 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
TRAV10A0A0B4J240 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV10A0A0B4J240 COX20-201ENST00000366528 568 ntTSL 2 BASIC15.32■□□□□ 0.04
TRAV10A0A0B4J240 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV10A0A0B4J240 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TRAV10A0A0B4J240 GALNS-213ENST00000569433 723 ntTSL 3 BASIC15.32■□□□□ 0.04
TRAV10A0A0B4J240 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC15.32■□□□□ 0.04
TRAV10A0A0B4J240 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC15.32■□□□□ 0.04
TRAV10A0A0B4J240 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC15.32■□□□□ 0.04
TRAV10A0A0B4J240 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV10A0A0B4J240 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TRAV10A0A0B4J240 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV10A0A0B4J240 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV10A0A0B4J240 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV10A0A0B4J240 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAV10A0A0B4J240 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TRAV10A0A0B4J240 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV10A0A0B4J240 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC15.32■□□□□ 0.04
TRAV10A0A0B4J240 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV10A0A0B4J240 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV10A0A0B4J240 DUSP8P3-201ENST00000399571 1760 ntBASIC15.31■□□□□ 0.04
TRAV10A0A0B4J240 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV10A0A0B4J240 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV10A0A0B4J240 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms