Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IGKV1D-43A0A0B4J1Z2 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
IGKV1D-43A0A0B4J1Z2 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IGKV1D-43A0A0B4J1Z2 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
IGKV1D-43A0A0B4J1Z2 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
IGKV1D-43A0A0B4J1Z2 C11orf96-202ENST00000528572 1834 ntBASIC19.3■□□□□ 0.68
IGKV1D-43A0A0B4J1Z2 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.29■□□□□ 0.68
IGKV1D-43A0A0B4J1Z2 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
IGKV1D-43A0A0B4J1Z2 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
IGKV1D-43A0A0B4J1Z2 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
IGKV1D-43A0A0B4J1Z2 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
IGKV1D-43A0A0B4J1Z2 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
IGKV1D-43A0A0B4J1Z2 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.29■□□□□ 0.68
IGKV1D-43A0A0B4J1Z2 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.29■□□□□ 0.68
IGKV1D-43A0A0B4J1Z2 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
IGKV1D-43A0A0B4J1Z2 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
IGKV1D-43A0A0B4J1Z2 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
IGKV1D-43A0A0B4J1Z2 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.29■□□□□ 0.68
IGKV1D-43A0A0B4J1Z2 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
IGKV1D-43A0A0B4J1Z2 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
IGKV1D-43A0A0B4J1Z2 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.28■□□□□ 0.68
IGKV1D-43A0A0B4J1Z2 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
IGKV1D-43A0A0B4J1Z2 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
IGKV1D-43A0A0B4J1Z2 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
IGKV1D-43A0A0B4J1Z2 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.28■□□□□ 0.68
IGKV1D-43A0A0B4J1Z2 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.28■□□□□ 0.68
IGKV1D-43A0A0B4J1Z2 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
IGKV1D-43A0A0B4J1Z2 DUX4L19-201ENST00000557448 1267 ntBASIC19.28■□□□□ 0.68
IGKV1D-43A0A0B4J1Z2 AL138724.1-201ENST00000606771 1088 ntBASIC19.28■□□□□ 0.68
IGKV1D-43A0A0B4J1Z2 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
IGKV1D-43A0A0B4J1Z2 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.28■□□□□ 0.68
IGKV1D-43A0A0B4J1Z2 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.28■□□□□ 0.68
IGKV1D-43A0A0B4J1Z2 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
IGKV1D-43A0A0B4J1Z2 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
IGKV1D-43A0A0B4J1Z2 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
IGKV1D-43A0A0B4J1Z2 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
IGKV1D-43A0A0B4J1Z2 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
IGKV1D-43A0A0B4J1Z2 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
IGKV1D-43A0A0B4J1Z2 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.28■□□□□ 0.68
IGKV1D-43A0A0B4J1Z2 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.27■□□□□ 0.68
IGKV1D-43A0A0B4J1Z2 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
IGKV1D-43A0A0B4J1Z2 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
IGKV1D-43A0A0B4J1Z2 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
IGKV1D-43A0A0B4J1Z2 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
IGKV1D-43A0A0B4J1Z2 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
IGKV1D-43A0A0B4J1Z2 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
IGKV1D-43A0A0B4J1Z2 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.27■□□□□ 0.68
IGKV1D-43A0A0B4J1Z2 AC136469.2-201ENST00000623944 1028 ntBASIC19.27■□□□□ 0.68
IGKV1D-43A0A0B4J1Z2 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
IGKV1D-43A0A0B4J1Z2 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
IGKV1D-43A0A0B4J1Z2 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.27■□□□□ 0.68
IGKV1D-43A0A0B4J1Z2 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
IGKV1D-43A0A0B4J1Z2 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
IGKV1D-43A0A0B4J1Z2 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
IGKV1D-43A0A0B4J1Z2 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
IGKV1D-43A0A0B4J1Z2 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.26■□□□□ 0.67
IGKV1D-43A0A0B4J1Z2 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.26■□□□□ 0.67
IGKV1D-43A0A0B4J1Z2 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
IGKV1D-43A0A0B4J1Z2 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
IGKV1D-43A0A0B4J1Z2 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
IGKV1D-43A0A0B4J1Z2 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
IGKV1D-43A0A0B4J1Z2 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
IGKV1D-43A0A0B4J1Z2 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
IGKV1D-43A0A0B4J1Z2 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
IGKV1D-43A0A0B4J1Z2 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.26■□□□□ 0.67
IGKV1D-43A0A0B4J1Z2 AC011298.3-201ENST00000615796 283 ntBASIC19.26■□□□□ 0.67
IGKV1D-43A0A0B4J1Z2 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.26■□□□□ 0.67
IGKV1D-43A0A0B4J1Z2 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
IGKV1D-43A0A0B4J1Z2 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
IGKV1D-43A0A0B4J1Z2 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
IGKV1D-43A0A0B4J1Z2 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
IGKV1D-43A0A0B4J1Z2 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.25■□□□□ 0.67
IGKV1D-43A0A0B4J1Z2 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IGKV1D-43A0A0B4J1Z2 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
IGKV1D-43A0A0B4J1Z2 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
IGKV1D-43A0A0B4J1Z2 UNC93B3-201ENST00000308076 687 ntBASIC19.25■□□□□ 0.67
IGKV1D-43A0A0B4J1Z2 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.25■□□□□ 0.67
IGKV1D-43A0A0B4J1Z2 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
IGKV1D-43A0A0B4J1Z2 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.25■□□□□ 0.67
IGKV1D-43A0A0B4J1Z2 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
IGKV1D-43A0A0B4J1Z2 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
IGKV1D-43A0A0B4J1Z2 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IGKV1D-43A0A0B4J1Z2 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
IGKV1D-43A0A0B4J1Z2 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
IGKV1D-43A0A0B4J1Z2 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
IGKV1D-43A0A0B4J1Z2 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
IGKV1D-43A0A0B4J1Z2 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
IGKV1D-43A0A0B4J1Z2 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
IGKV1D-43A0A0B4J1Z2 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.24■□□□□ 0.67
IGKV1D-43A0A0B4J1Z2 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.24■□□□□ 0.67
IGKV1D-43A0A0B4J1Z2 SLC47A1P1-202ENST00000449666 945 ntBASIC19.24■□□□□ 0.67
IGKV1D-43A0A0B4J1Z2 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
IGKV1D-43A0A0B4J1Z2 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
IGKV1D-43A0A0B4J1Z2 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
IGKV1D-43A0A0B4J1Z2 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
IGKV1D-43A0A0B4J1Z2 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.23■□□□□ 0.67
IGKV1D-43A0A0B4J1Z2 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
IGKV1D-43A0A0B4J1Z2 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.23■□□□□ 0.67
IGKV1D-43A0A0B4J1Z2 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
IGKV1D-43A0A0B4J1Z2 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms