Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV9-1A0A075B6T8 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV9-1A0A075B6T8 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
TRAV9-1A0A075B6T8 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC16.35■□□□□ 0.21
TRAV9-1A0A075B6T8 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
TRAV9-1A0A075B6T8 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV9-1A0A075B6T8 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV9-1A0A075B6T8 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV9-1A0A075B6T8 AL391422.3-201ENST00000603791 2761 ntBASIC16.34■□□□□ 0.21
TRAV9-1A0A075B6T8 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV9-1A0A075B6T8 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV9-1A0A075B6T8 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
TRAV9-1A0A075B6T8 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC16.34■□□□□ 0.21
TRAV9-1A0A075B6T8 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV9-1A0A075B6T8 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV9-1A0A075B6T8 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV9-1A0A075B6T8 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.34■□□□□ 0.21
TRAV9-1A0A075B6T8 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
TRAV9-1A0A075B6T8 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV9-1A0A075B6T8 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV9-1A0A075B6T8 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRAV9-1A0A075B6T8 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC16.34■□□□□ 0.21
TRAV9-1A0A075B6T8 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRAV9-1A0A075B6T8 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
TRAV9-1A0A075B6T8 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRAV9-1A0A075B6T8 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRAV9-1A0A075B6T8 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
TRAV9-1A0A075B6T8 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV9-1A0A075B6T8 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV9-1A0A075B6T8 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV9-1A0A075B6T8 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
TRAV9-1A0A075B6T8 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC16.33■□□□□ 0.2
TRAV9-1A0A075B6T8 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC16.33■□□□□ 0.2
TRAV9-1A0A075B6T8 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV9-1A0A075B6T8 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC16.33■□□□□ 0.2
TRAV9-1A0A075B6T8 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV9-1A0A075B6T8 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV9-1A0A075B6T8 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC16.33■□□□□ 0.2
TRAV9-1A0A075B6T8 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV9-1A0A075B6T8 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV9-1A0A075B6T8 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV9-1A0A075B6T8 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC16.33■□□□□ 0.2
TRAV9-1A0A075B6T8 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAV9-1A0A075B6T8 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV9-1A0A075B6T8 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV9-1A0A075B6T8 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV9-1A0A075B6T8 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV9-1A0A075B6T8 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV9-1A0A075B6T8 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV9-1A0A075B6T8 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC16.32■□□□□ 0.2
TRAV9-1A0A075B6T8 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV9-1A0A075B6T8 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC16.32■□□□□ 0.2
TRAV9-1A0A075B6T8 AL157400.5-201ENST00000507624 621 ntBASIC16.32■□□□□ 0.2
TRAV9-1A0A075B6T8 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV9-1A0A075B6T8 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC16.32■□□□□ 0.2
TRAV9-1A0A075B6T8 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRAV9-1A0A075B6T8 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC16.32■□□□□ 0.2
TRAV9-1A0A075B6T8 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC16.31■□□□□ 0.2
TRAV9-1A0A075B6T8 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV9-1A0A075B6T8 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
TRAV9-1A0A075B6T8 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV9-1A0A075B6T8 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV9-1A0A075B6T8 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV9-1A0A075B6T8 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC16.31■□□□□ 0.2
TRAV9-1A0A075B6T8 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
TRAV9-1A0A075B6T8 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV9-1A0A075B6T8 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV9-1A0A075B6T8 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV9-1A0A075B6T8 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV9-1A0A075B6T8 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
TRAV9-1A0A075B6T8 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC16.31■□□□□ 0.2
TRAV9-1A0A075B6T8 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV9-1A0A075B6T8 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC16.31■□□□□ 0.2
TRAV9-1A0A075B6T8 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC16.31■□□□□ 0.2
TRAV9-1A0A075B6T8 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV9-1A0A075B6T8 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
TRAV9-1A0A075B6T8 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV9-1A0A075B6T8 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV9-1A0A075B6T8 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV9-1A0A075B6T8 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
TRAV9-1A0A075B6T8 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV9-1A0A075B6T8 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV9-1A0A075B6T8 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV9-1A0A075B6T8 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAV9-1A0A075B6T8 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
TRAV9-1A0A075B6T8 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV9-1A0A075B6T8 OXCT2P1-201ENST00000447263 1535 ntBASIC16.3■□□□□ 0.2
TRAV9-1A0A075B6T8 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
TRAV9-1A0A075B6T8 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC16.3■□□□□ 0.2
TRAV9-1A0A075B6T8 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV9-1A0A075B6T8 SMPD5-203ENST00000639008 1464 ntBASIC16.3■□□□□ 0.2
TRAV9-1A0A075B6T8 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV9-1A0A075B6T8 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV9-1A0A075B6T8 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
TRAV9-1A0A075B6T8 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC16.3■□□□□ 0.2
TRAV9-1A0A075B6T8 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV9-1A0A075B6T8 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TRAV9-1A0A075B6T8 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV9-1A0A075B6T8 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRAV9-1A0A075B6T8 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms