Protein–RNA interactions for Protein: Q9Y4K3

TRAF6, TNF receptor-associated factor 6, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6Q9Y4K3 AAK1-201ENST00000406297 4499 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TRAF6Q9Y4K3 PCSK9-201ENST00000302118 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRAF6Q9Y4K3 ARHGAP27-202ENST00000376922 3628 ntTSL 2 BASIC12.27□□□□□ -0.45
TRAF6Q9Y4K3 NBR1-202ENST00000542611 2703 ntTSL 2 BASIC12.27□□□□□ -0.45
TRAF6Q9Y4K3 TRAF3IP2-202ENST00000359831 2264 ntAPPRIS ALT1 TSL 2 BASIC12.27□□□□□ -0.45
TRAF6Q9Y4K3 EEF2KMT-202ENST00000458008 2268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRAF6Q9Y4K3 AC008132.1-203ENST00000412938 5920 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TRAF6Q9Y4K3 BCAS3-222ENST00000589222 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRAF6Q9Y4K3 RNF24-201ENST00000336095 7453 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRAF6Q9Y4K3 SLC8A3-207ENST00000528359 2840 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TRAF6Q9Y4K3 SLC8A3-210ENST00000534137 2837 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TRAF6Q9Y4K3 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRAF6Q9Y4K3 AP000821.1-201ENST00000567082 1909 ntBASIC12.27□□□□□ -0.45
TRAF6Q9Y4K3 ARSK-201ENST00000380009 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRAF6Q9Y4K3 C22orf39-202ENST00000399562 3350 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
TRAF6Q9Y4K3 AC139099.1-202ENST00000574098 2409 ntBASIC12.27□□□□□ -0.45
TRAF6Q9Y4K3 GTF2I-218ENST00000620879 4352 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRAF6Q9Y4K3 WDR78-201ENST00000371022 1520 ntTSL 5 BASIC12.27□□□□□ -0.45
TRAF6Q9Y4K3 SEMA4D-213ENST00000455551 3594 ntTSL 5 BASIC12.27□□□□□ -0.45
TRAF6Q9Y4K3 C1RL-AS1-201ENST00000382215 2086 ntTSL 2 BASIC12.26□□□□□ -0.45
TRAF6Q9Y4K3 EFL1-201ENST00000268206 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAF6Q9Y4K3 CCDC32-214ENST00000561011 1577 ntTSL 2 BASIC12.26□□□□□ -0.45
TRAF6Q9Y4K3 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TRAF6Q9Y4K3 LILRB3-202ENST00000346401 2204 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
TRAF6Q9Y4K3 OR6F1-203ENST00000641444 1698 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
TRAF6Q9Y4K3 FAM131A-211ENST00000639617 4450 ntTSL 5 BASIC12.26□□□□□ -0.45
TRAF6Q9Y4K3 PCDHGA2-202ENST00000528330 4543 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
TRAF6Q9Y4K3 AKNA-202ENST00000307564 7380 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAF6Q9Y4K3 AKAP13-202ENST00000394510 9128 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
TRAF6Q9Y4K3 AC026797.1-201ENST00000624837 2869 ntBASIC12.26□□□□□ -0.45
TRAF6Q9Y4K3 AC005537.1-203ENST00000629291 1748 ntTSL 5 BASIC12.26□□□□□ -0.45
TRAF6Q9Y4K3 PTPRG-201ENST00000295874 4650 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAF6Q9Y4K3 AC100868.1-201ENST00000262283 2413 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
TRAF6Q9Y4K3 BGN-201ENST00000331595 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAF6Q9Y4K3 MON2-212ENST00000552115 3760 ntTSL 5 BASIC12.26□□□□□ -0.45
TRAF6Q9Y4K3 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAF6Q9Y4K3 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
TRAF6Q9Y4K3 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAF6Q9Y4K3 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAF6Q9Y4K3 OR4C46-201ENST00000328188 930 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
TRAF6Q9Y4K3 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
TRAF6Q9Y4K3 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAF6Q9Y4K3 FXNP2-201ENST00000411625 547 ntBASIC12.26□□□□□ -0.45
TRAF6Q9Y4K3 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC12.26□□□□□ -0.45
TRAF6Q9Y4K3 AC108879.1-201ENST00000438026 828 ntTSL 3 BASIC12.26□□□□□ -0.45
TRAF6Q9Y4K3 COL18A1-AS2-201ENST00000446475 552 ntTSL 4 BASIC12.26□□□□□ -0.45
TRAF6Q9Y4K3 RPS2P36-201ENST00000456516 831 ntBASIC12.26□□□□□ -0.45
TRAF6Q9Y4K3 BPIFB5P-201ENST00000457066 1099 ntBASIC12.26□□□□□ -0.45
TRAF6Q9Y4K3 RN7SL789P-201ENST00000478944 293 ntBASIC12.26□□□□□ -0.45
TRAF6Q9Y4K3 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC12.26□□□□□ -0.45
TRAF6Q9Y4K3 ZNF576-204ENST00000528387 859 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
TRAF6Q9Y4K3 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC12.26□□□□□ -0.45
TRAF6Q9Y4K3 MIR3147-201ENST00000577811 66 ntBASIC12.26□□□□□ -0.45
TRAF6Q9Y4K3 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC12.26□□□□□ -0.45
TRAF6Q9Y4K3 TYMSP2-201ENST00000589501 424 ntBASIC12.26□□□□□ -0.45
TRAF6Q9Y4K3 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC12.26□□□□□ -0.45
TRAF6Q9Y4K3 AC009061.2-202ENST00000602596 696 ntTSL 2 BASIC12.26□□□□□ -0.45
TRAF6Q9Y4K3 TMEM230-211ENST00000615008 594 ntTSL 4 BASIC12.26□□□□□ -0.45
TRAF6Q9Y4K3 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC12.26□□□□□ -0.45
TRAF6Q9Y4K3 MICAL2-201ENST00000256194 3906 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAF6Q9Y4K3 MNAT1-201ENST00000261245 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAF6Q9Y4K3 DCDC2B-201ENST00000409358 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAF6Q9Y4K3 ABR-201ENST00000291107 2673 ntTSL 2 BASIC12.26□□□□□ -0.45
TRAF6Q9Y4K3 ZNF318-201ENST00000361428 8006 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAF6Q9Y4K3 BDNF-218ENST00000533246 4000 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAF6Q9Y4K3 ALDH18A1-202ENST00000371224 3359 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAF6Q9Y4K3 MED24-201ENST00000356271 3446 ntTSL 2 BASIC12.26□□□□□ -0.45
TRAF6Q9Y4K3 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TRAF6Q9Y4K3 FKBP4P8-201ENST00000610931 1369 ntBASIC12.26□□□□□ -0.45
TRAF6Q9Y4K3 GABPB1-203ENST00000380877 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAF6Q9Y4K3 SORBS2-203ENST00000319471 2824 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TRAF6Q9Y4K3 RALGAPB-201ENST00000262879 8663 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAF6Q9Y4K3 SEPT9-204ENST00000427180 3635 ntTSL 2 BASIC12.26□□□□□ -0.45
TRAF6Q9Y4K3 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAF6Q9Y4K3 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TRAF6Q9Y4K3 AC005682.1-201ENST00000452069 1467 ntBASIC12.26□□□□□ -0.45
TRAF6Q9Y4K3 PLA2G6-203ENST00000402064 3011 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TRAF6Q9Y4K3 CAT-201ENST00000241052 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TRAF6Q9Y4K3 TNFSF10-202ENST00000420541 1619 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TRAF6Q9Y4K3 CA2-201ENST00000285379 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRAF6Q9Y4K3 PES1P1-201ENST00000508165 1736 ntBASIC12.25□□□□□ -0.45
TRAF6Q9Y4K3 SPRTN-202ENST00000295050 3468 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRAF6Q9Y4K3 PLEKHG4-204ENST00000427155 4455 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
TRAF6Q9Y4K3 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC12.25□□□□□ -0.45
TRAF6Q9Y4K3 SCAMP1-207ENST00000621999 4509 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRAF6Q9Y4K3 GK-207ENST00000427190 4573 ntTSL 5 BASIC12.25□□□□□ -0.45
TRAF6Q9Y4K3 PRAMEF9-201ENST00000415919 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRAF6Q9Y4K3 CHRNA1-208ENST00000636168 1862 ntTSL 5 BASIC12.25□□□□□ -0.45
TRAF6Q9Y4K3 MRVI1-214ENST00000534266 2824 ntTSL 2 BASIC12.25□□□□□ -0.45
TRAF6Q9Y4K3 F2R-201ENST00000319211 3821 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRAF6Q9Y4K3 KCNQ3-201ENST00000388996 11510 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRAF6Q9Y4K3 ETF1-202ENST00000499810 3874 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TRAF6Q9Y4K3 C1QTNF3-201ENST00000231338 1959 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRAF6Q9Y4K3 MROH7-204ENST00000409996 2977 ntTSL 5 BASIC12.25□□□□□ -0.45
TRAF6Q9Y4K3 ANKRD20A3-201ENST00000611388 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRAF6Q9Y4K3 KCNAB1-201ENST00000302490 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRAF6Q9Y4K3 KCNA4-201ENST00000328224 4172 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRAF6Q9Y4K3 ATAD2-201ENST00000287394 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TRAF6Q9Y4K3 CYFIP1-207ENST00000617556 5674 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TRAF6Q9Y4K3 EPS8L3-203ENST00000369805 2325 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms