Protein–RNA interactions for Protein: Q9Y4K3

TRAF6, TNF receptor-associated factor 6, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6Q9Y4K3 UMPS-201ENST00000232607 6738 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRAF6Q9Y4K3 SEC14L1-204ENST00000436233 5295 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRAF6Q9Y4K3 BCAR3-203ENST00000370244 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRAF6Q9Y4K3 SLC22A12-204ENST00000377574 3206 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRAF6Q9Y4K3 NRAP-201ENST00000359988 5580 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRAF6Q9Y4K3 ERVK13-1-205ENST00000568395 5578 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TRAF6Q9Y4K3 NOL10-201ENST00000345985 3333 ntTSL 2 BASIC12.28□□□□□ -0.44
TRAF6Q9Y4K3 AC068775.1-201ENST00000322446 2142 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TRAF6Q9Y4K3 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC12.28□□□□□ -0.44
TRAF6Q9Y4K3 DTL-201ENST00000366991 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRAF6Q9Y4K3 LINC01763-201ENST00000425185 1547 ntTSL 3 BASIC12.28□□□□□ -0.44
TRAF6Q9Y4K3 ARHGAP12-203ENST00000375245 4958 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TRAF6Q9Y4K3 COL19A1-205ENST00000620364 6233 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRAF6Q9Y4K3 TROVE2-203ENST00000367444 1857 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TRAF6Q9Y4K3 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRAF6Q9Y4K3 RPLP1-202ENST00000357790 445 ntTSL 2 BASIC12.28□□□□□ -0.44
TRAF6Q9Y4K3 RNA5SP84-201ENST00000364740 107 ntBASIC12.28□□□□□ -0.44
TRAF6Q9Y4K3 NDUFS5-201ENST00000372967 544 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRAF6Q9Y4K3 NDUFS5-202ENST00000372969 548 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRAF6Q9Y4K3 LINC01556-201ENST00000377186 466 ntTSL 2 BASIC12.28□□□□□ -0.44
TRAF6Q9Y4K3 TOMM5-202ENST00000377773 808 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TRAF6Q9Y4K3 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
TRAF6Q9Y4K3 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TRAF6Q9Y4K3 TXLNGY-202ENST00000407724 1000 ntTSL 3 BASIC12.28□□□□□ -0.44
TRAF6Q9Y4K3 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TRAF6Q9Y4K3 HNRNPA3P12-201ENST00000437410 1063 ntBASIC12.28□□□□□ -0.44
TRAF6Q9Y4K3 ZNF877P-201ENST00000437614 612 ntBASIC12.28□□□□□ -0.44
TRAF6Q9Y4K3 LINC00634-202ENST00000505157 222 ntBASIC12.28□□□□□ -0.44
TRAF6Q9Y4K3 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC12.28□□□□□ -0.44
TRAF6Q9Y4K3 AC104117.1-201ENST00000517817 900 ntBASIC12.28□□□□□ -0.44
TRAF6Q9Y4K3 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TRAF6Q9Y4K3 WASIR2-201ENST00000527434 1054 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TRAF6Q9Y4K3 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC12.28□□□□□ -0.44
TRAF6Q9Y4K3 MIR4649-201ENST00000582839 64 ntBASIC12.28□□□□□ -0.44
TRAF6Q9Y4K3 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC12.28□□□□□ -0.44
TRAF6Q9Y4K3 AC239600.1-201ENST00000603201 462 ntBASIC12.28□□□□□ -0.44
TRAF6Q9Y4K3 NAMA-206ENST00000605377 509 ntTSL 5 BASIC12.28□□□□□ -0.44
TRAF6Q9Y4K3 COX6A1P2-201ENST00000620597 330 ntBASIC12.28□□□□□ -0.44
TRAF6Q9Y4K3 AC138466.4-201ENST00000623965 852 ntBASIC12.28□□□□□ -0.44
TRAF6Q9Y4K3 AL596223.1-201ENST00000450995 1933 ntTSL 2 BASIC12.28□□□□□ -0.44
TRAF6Q9Y4K3 LINC02052-202ENST00000427914 2285 ntTSL 2 BASIC12.28□□□□□ -0.44
TRAF6Q9Y4K3 PATJ-215ENST00000635137 2298 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TRAF6Q9Y4K3 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
TRAF6Q9Y4K3 DNASE1L3-207ENST00000486455 1321 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
TRAF6Q9Y4K3 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC12.28□□□□□ -0.44
TRAF6Q9Y4K3 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC12.28□□□□□ -0.44
TRAF6Q9Y4K3 AC093583.1-201ENST00000462083 2383 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TRAF6Q9Y4K3 MPI-208ENST00000563786 1707 ntTSL 5 BASIC12.28□□□□□ -0.44
TRAF6Q9Y4K3 SYDE1-203ENST00000600252 3832 ntTSL 2 BASIC12.28□□□□□ -0.44
TRAF6Q9Y4K3 RAB43-205ENST00000393308 4193 ntAPPRIS P1 TSL 4 BASIC12.28□□□□□ -0.44
TRAF6Q9Y4K3 ARHGEF10-205ENST00000518288 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRAF6Q9Y4K3 SLCO2A1-201ENST00000310926 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRAF6Q9Y4K3 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRAF6Q9Y4K3 TTYH3-203ENST00000403167 4263 ntTSL 5 BASIC12.28□□□□□ -0.44
TRAF6Q9Y4K3 PKP2-202ENST00000340811 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TRAF6Q9Y4K3 NEFM-204ENST00000518131 2500 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
TRAF6Q9Y4K3 A2M-AS1-201ENST00000499762 2192 ntTSL 2 BASIC12.28□□□□□ -0.44
TRAF6Q9Y4K3 CACUL1-201ENST00000369151 11311 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
TRAF6Q9Y4K3 ATP8B3-202ENST00000525591 4014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
TRAF6Q9Y4K3 ABCD1-201ENST00000218104 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
TRAF6Q9Y4K3 AC011239.2-201ENST00000624820 1489 ntBASIC12.27□□□□□ -0.44
TRAF6Q9Y4K3 LINC01898-201ENST00000564156 1903 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
TRAF6Q9Y4K3 LMNA-206ENST00000368300 3190 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
TRAF6Q9Y4K3 CHST15-202ENST00000435907 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
TRAF6Q9Y4K3 MAMLD1-205ENST00000432680 3224 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
TRAF6Q9Y4K3 CEP63-204ENST00000383229 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
TRAF6Q9Y4K3 CHST9-201ENST00000580774 2033 ntTSL 3 BASIC12.27□□□□□ -0.44
TRAF6Q9Y4K3 FAM46A-202ENST00000369754 5664 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
TRAF6Q9Y4K3 CUL9-201ENST00000252050 7780 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
TRAF6Q9Y4K3 CWC22-202ENST00000410053 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRAF6Q9Y4K3 EIF3C-204ENST00000564243 2870 ntTSL 2 BASIC12.27□□□□□ -0.45
TRAF6Q9Y4K3 AC080112.4-201ENST00000623156 2491 ntBASIC12.27□□□□□ -0.45
TRAF6Q9Y4K3 ZNF583-201ENST00000291598 2538 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
TRAF6Q9Y4K3 EDDM3B-201ENST00000326783 896 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRAF6Q9Y4K3 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
TRAF6Q9Y4K3 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRAF6Q9Y4K3 CCL19-202ENST00000378800 414 ntTSL 2 BASIC12.27□□□□□ -0.45
TRAF6Q9Y4K3 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRAF6Q9Y4K3 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRAF6Q9Y4K3 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRAF6Q9Y4K3 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRAF6Q9Y4K3 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC12.27□□□□□ -0.45
TRAF6Q9Y4K3 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC12.27□□□□□ -0.45
TRAF6Q9Y4K3 VDAC1P13-201ENST00000447826 859 ntBASIC12.27□□□□□ -0.45
TRAF6Q9Y4K3 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC12.27□□□□□ -0.45
TRAF6Q9Y4K3 IGHVII-74-1-201ENST00000517572 241 ntBASIC12.27□□□□□ -0.45
TRAF6Q9Y4K3 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC12.27□□□□□ -0.45
TRAF6Q9Y4K3 AC069503.1-201ENST00000538710 816 ntTSL 2 BASIC12.27□□□□□ -0.45
TRAF6Q9Y4K3 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRAF6Q9Y4K3 AC127459.2-201ENST00000567395 932 ntTSL 3 BASIC12.27□□□□□ -0.45
TRAF6Q9Y4K3 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
TRAF6Q9Y4K3 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC12.27□□□□□ -0.45
TRAF6Q9Y4K3 URAHP-205ENST00000610227 398 ntBASIC12.27□□□□□ -0.45
TRAF6Q9Y4K3 PLEKHA2-209ENST00000617275 5582 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
TRAF6Q9Y4K3 ACTG1-216ENST00000615544 1723 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRAF6Q9Y4K3 AC007277.1-201ENST00000428156 2189 ntTSL 2 BASIC12.27□□□□□ -0.45
TRAF6Q9Y4K3 ATAT1-205ENST00000376483 2646 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
TRAF6Q9Y4K3 E2F8-205ENST00000620009 3519 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
TRAF6Q9Y4K3 CA6-203ENST00000377443 1319 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
TRAF6Q9Y4K3 C9orf3-203ENST00000375315 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms