Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 BDNF-202ENST00000356660 4018 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SLC1A1P43005 SSX2IP-201ENST00000342203 5835 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SLC1A1P43005 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SLC1A1P43005 AC008132.1-203ENST00000412938 5920 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SLC1A1P43005 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
SLC1A1P43005 B3GALT5-204ENST00000398714 2341 ntTSL 5 BASIC13.17□□□□□ -0.3
SLC1A1P43005 STIM1-209ENST00000527651 2184 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SLC1A1P43005 AK7-201ENST00000267584 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SLC1A1P43005 FAM47A-202ENST00000613251 2518 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
SLC1A1P43005 ACTG1-216ENST00000615544 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SLC1A1P43005 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SLC1A1P43005 VASH2-203ENST00000366965 3572 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SLC1A1P43005 SV2C-201ENST00000322285 3010 ntTSL 2 BASIC13.16□□□□□ -0.3
SLC1A1P43005 TRMT61B-201ENST00000306108 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SLC1A1P43005 ATP2C2-201ENST00000262429 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SLC1A1P43005 PLXDC1-206ENST00000444911 2082 ntTSL 2 BASIC13.16□□□□□ -0.3
SLC1A1P43005 TTC17-202ENST00000299240 3648 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SLC1A1P43005 CSF3R-204ENST00000373104 2953 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SLC1A1P43005 UAP1L1-201ENST00000360271 3201 ntTSL 2 BASIC13.16□□□□□ -0.3
SLC1A1P43005 TMEM120B-204ENST00000449592 7461 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SLC1A1P43005 ZNF331-201ENST00000253144 5042 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SLC1A1P43005 HTR3D-202ENST00000382489 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SLC1A1P43005 ASAH2B-202ENST00000374007 3715 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
SLC1A1P43005 ASPH-205ENST00000445642 3717 ntTSL 2 BASIC13.16□□□□□ -0.3
SLC1A1P43005 RUBCNL-208ENST00000429979 3979 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
SLC1A1P43005 ARHGEF10-205ENST00000518288 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SLC1A1P43005 LRRK2-202ENST00000343742 4740 ntTSL 5 BASIC13.16□□□□□ -0.3
SLC1A1P43005 BGN-201ENST00000331595 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SLC1A1P43005 NUBP1-201ENST00000283027 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SLC1A1P43005 AP000487.2-201ENST00000324630 394 ntTSL 3 BASIC13.16□□□□□ -0.3
SLC1A1P43005 SDC3-201ENST00000336798 6392 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SLC1A1P43005 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SLC1A1P43005 SLC35A2-203ENST00000376515 1044 ntTSL 3 BASIC13.16□□□□□ -0.3
SLC1A1P43005 IGHV1-45-201ENST00000390621 411 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
SLC1A1P43005 FAM178B-201ENST00000393526 1004 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SLC1A1P43005 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC13.16□□□□□ -0.3
SLC1A1P43005 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SLC1A1P43005 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC13.16□□□□□ -0.3
SLC1A1P43005 PLA2G6-210ENST00000435484 612 ntTSL 4 BASIC13.16□□□□□ -0.3
SLC1A1P43005 CHN2-214ENST00000439711 755 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SLC1A1P43005 AL928921.1-201ENST00000441033 708 ntTSL 3 BASIC13.16□□□□□ -0.3
SLC1A1P43005 AC063952.3-201ENST00000467756 308 ntBASIC13.16□□□□□ -0.3
SLC1A1P43005 SLIT2-204ENST00000504154 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SLC1A1P43005 AC010395.2-201ENST00000509899 904 ntBASIC13.16□□□□□ -0.3
SLC1A1P43005 CTBP2P4-201ENST00000513884 920 ntBASIC13.16□□□□□ -0.3
SLC1A1P43005 AL583722.3-201ENST00000553433 503 ntTSL 4 BASIC13.16□□□□□ -0.3
SLC1A1P43005 MIR4746-201ENST00000579802 71 ntBASIC13.16□□□□□ -0.3
SLC1A1P43005 APOC1-209ENST00000592885 562 ntTSL 3 BASIC13.16□□□□□ -0.3
SLC1A1P43005 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC13.16□□□□□ -0.3
SLC1A1P43005 AC048382.6-201ENST00000621980 1223 ntBASIC13.16□□□□□ -0.3
SLC1A1P43005 AC073592.2-201ENST00000623062 780 ntBASIC13.16□□□□□ -0.3
SLC1A1P43005 PISD-202ENST00000382151 2669 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
SLC1A1P43005 NEFL-201ENST00000610854 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SLC1A1P43005 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
SLC1A1P43005 BDNF-215ENST00000530861 3918 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SLC1A1P43005 CREB5-202ENST00000396298 2001 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SLC1A1P43005 CAMK2B-209ENST00000395749 4447 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SLC1A1P43005 LMX1A-202ENST00000342310 3545 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
SLC1A1P43005 SLC35B4-201ENST00000378509 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SLC1A1P43005 OPRM1-210ENST00000452687 1352 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SLC1A1P43005 C19orf47-208ENST00000582783 3628 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SLC1A1P43005 MYT1-205ENST00000622439 2140 ntTSL 5 BASIC13.16□□□□□ -0.3
SLC1A1P43005 MYO18B-202ENST00000407587 8090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SLC1A1P43005 CCDC114-201ENST00000315396 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SLC1A1P43005 OACYLP-201ENST00000417918 2208 ntBASIC13.16□□□□□ -0.3
SLC1A1P43005 SPATS2L-205ENST00000409151 1979 ntTSL 2 BASIC13.16□□□□□ -0.3
SLC1A1P43005 RALYL-201ENST00000517638 1972 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
SLC1A1P43005 IST1-219ENST00000541571 1962 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
SLC1A1P43005 AC025271.4-201ENST00000621477 1726 ntBASIC13.16□□□□□ -0.3
SLC1A1P43005 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC13.16□□□□□ -0.3
SLC1A1P43005 SLC6A1-201ENST00000287766 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SLC1A1P43005 CLU-202ENST00000405140 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SLC1A1P43005 METAP2-201ENST00000261220 1836 ntTSL 2 BASIC13.16□□□□□ -0.3
SLC1A1P43005 IL1R2-201ENST00000332549 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SLC1A1P43005 CALM1-201ENST00000356978 4242 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SLC1A1P43005 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SLC1A1P43005 GOLGA1-202ENST00000373555 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SLC1A1P43005 GAPDH-205ENST00000396861 1348 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
SLC1A1P43005 HKR1-204ENST00000544914 2854 ntTSL 2 BASIC13.15□□□□□ -0.3
SLC1A1P43005 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC13.15□□□□□ -0.3
SLC1A1P43005 CAPN9-201ENST00000271971 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SLC1A1P43005 CACNG3-201ENST00000005284 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SLC1A1P43005 RNF17-202ENST00000255325 2134 ntTSL 2 BASIC13.15□□□□□ -0.3
SLC1A1P43005 TKT-203ENST00000423525 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SLC1A1P43005 PNPLA7-201ENST00000277531 4581 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
SLC1A1P43005 AL021408.2-201ENST00000624196 1544 ntBASIC13.15□□□□□ -0.3
SLC1A1P43005 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SLC1A1P43005 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
SLC1A1P43005 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC13.15□□□□□ -0.3
SLC1A1P43005 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
SLC1A1P43005 FOLR1-204ENST00000393681 1061 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SLC1A1P43005 AP001331.1-201ENST00000413008 1015 ntBASIC13.15□□□□□ -0.3
SLC1A1P43005 RPL19P20-201ENST00000415648 591 ntBASIC13.15□□□□□ -0.3
SLC1A1P43005 AL773545.2-201ENST00000442149 472 ntBASIC13.15□□□□□ -0.3
SLC1A1P43005 AL354733.3-201ENST00000448389 390 ntTSL 3 BASIC13.15□□□□□ -0.3
SLC1A1P43005 AC092944.1-204ENST00000475102 384 ntTSL 5 BASIC13.15□□□□□ -0.3
SLC1A1P43005 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC13.15□□□□□ -0.3
SLC1A1P43005 LINC01606-208ENST00000521653 557 ntTSL 4 BASIC13.15□□□□□ -0.3
SLC1A1P43005 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
SLC1A1P43005 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms