Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 FNBP4-201ENST00000263773 3972 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
NICN1Q9BSH3 TRIM39-204ENST00000396548 3198 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
NICN1Q9BSH3 STK26-203ENST00000394335 3017 ntTSL 2 BASIC10.87□□□□□ -0.67
NICN1Q9BSH3 NDST1-201ENST00000261797 8030 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
NICN1Q9BSH3 NR1I2-202ENST00000393716 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
NICN1Q9BSH3 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
NICN1Q9BSH3 ATAT1-205ENST00000376483 2646 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
NICN1Q9BSH3 SP140L-205ENST00000458341 1727 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
NICN1Q9BSH3 NSD2-205ENST00000382892 7706 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
NICN1Q9BSH3 AL357140.3-201ENST00000639753 1983 ntBASIC10.86□□□□□ -0.67
NICN1Q9BSH3 SLC25A30-207ENST00000539591 3608 ntTSL 2 BASIC10.86□□□□□ -0.67
NICN1Q9BSH3 C3orf20-202ENST00000412910 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
NICN1Q9BSH3 RPS24-204ENST00000440692 2814 ntTSL 3 BASIC10.86□□□□□ -0.67
NICN1Q9BSH3 TMPRSS13-201ENST00000430170 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
NICN1Q9BSH3 KRT8P46-201ENST00000512037 1426 ntBASIC10.86□□□□□ -0.67
NICN1Q9BSH3 TGM5-201ENST00000220420 2767 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
NICN1Q9BSH3 TGM5-205ENST00000610827 2756 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
NICN1Q9BSH3 SIRPA-201ENST00000356025 3867 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
NICN1Q9BSH3 RHOH-217ENST00000610353 2268 ntAPPRIS P1 TSL 4 BASIC10.86□□□□□ -0.67
NICN1Q9BSH3 GOLGA8G-203ENST00000525590 2009 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
NICN1Q9BSH3 GOLGA8F-202ENST00000532622 2009 ntAPPRIS P5 TSL 5 BASIC10.86□□□□□ -0.67
NICN1Q9BSH3 UGT1A4-201ENST00000373409 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NICN1Q9BSH3 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NICN1Q9BSH3 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NICN1Q9BSH3 WDR81-201ENST00000309182 3808 ntTSL 2 BASIC10.86□□□□□ -0.67
NICN1Q9BSH3 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC10.86□□□□□ -0.67
NICN1Q9BSH3 UFM1-202ENST00000379649 846 ntTSL 4 BASIC10.86□□□□□ -0.67
NICN1Q9BSH3 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC10.86□□□□□ -0.67
NICN1Q9BSH3 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
NICN1Q9BSH3 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC10.86□□□□□ -0.67
NICN1Q9BSH3 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC10.86□□□□□ -0.67
NICN1Q9BSH3 HPGD-203ENST00000422112 805 ntTSL 2 BASIC10.86□□□□□ -0.67
NICN1Q9BSH3 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
NICN1Q9BSH3 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
NICN1Q9BSH3 P2RX6P-202ENST00000450626 357 ntBASIC10.86□□□□□ -0.67
NICN1Q9BSH3 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC10.86□□□□□ -0.67
NICN1Q9BSH3 KRT18P63-201ENST00000505463 979 ntBASIC10.86□□□□□ -0.67
NICN1Q9BSH3 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
NICN1Q9BSH3 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC10.86□□□□□ -0.67
NICN1Q9BSH3 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC10.86□□□□□ -0.67
NICN1Q9BSH3 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC10.86□□□□□ -0.67
NICN1Q9BSH3 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC10.86□□□□□ -0.67
NICN1Q9BSH3 AL031713.1-201ENST00000564813 661 ntBASIC10.86□□□□□ -0.67
NICN1Q9BSH3 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC10.86□□□□□ -0.67
NICN1Q9BSH3 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC10.86□□□□□ -0.67
NICN1Q9BSH3 AL021578.1-201ENST00000613646 709 ntBASIC10.86□□□□□ -0.67
NICN1Q9BSH3 AL137028.1-201ENST00000620521 555 ntBASIC10.86□□□□□ -0.67
NICN1Q9BSH3 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
NICN1Q9BSH3 AL805961.1-201ENST00000642026 753 ntBASIC10.86□□□□□ -0.67
NICN1Q9BSH3 SEMA4D-213ENST00000455551 3594 ntTSL 5 BASIC10.86□□□□□ -0.67
NICN1Q9BSH3 SERP1-203ENST00000479209 3934 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
NICN1Q9BSH3 RFX5-202ENST00000368870 2459 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
NICN1Q9BSH3 MRVI1-215ENST00000541483 2468 ntTSL 2 BASIC10.86□□□□□ -0.67
NICN1Q9BSH3 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC10.86□□□□□ -0.67
NICN1Q9BSH3 SEMA6D-201ENST00000316364 6099 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NICN1Q9BSH3 SETD7-201ENST00000274031 7365 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NICN1Q9BSH3 FAM13C-201ENST00000422313 1963 ntTSL 5 BASIC10.86□□□□□ -0.67
NICN1Q9BSH3 MAP10-201ENST00000418460 3516 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
NICN1Q9BSH3 NLGN3-205ENST00000536169 3863 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
NICN1Q9BSH3 FER1L5-206ENST00000624922 6367 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
NICN1Q9BSH3 CHST15-202ENST00000435907 4820 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NICN1Q9BSH3 DOCK4-204ENST00000428084 7997 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
NICN1Q9BSH3 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC10.86□□□□□ -0.67
NICN1Q9BSH3 TRMT61B-201ENST00000306108 1836 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
NICN1Q9BSH3 FAM107A-204ENST00000464064 2159 ntTSL 2 BASIC10.86□□□□□ -0.67
NICN1Q9BSH3 ZNF436-AS1-201ENST00000335648 2547 ntBASIC10.86□□□□□ -0.67
NICN1Q9BSH3 LPIN3-201ENST00000373257 4363 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
NICN1Q9BSH3 AC026469.1-201ENST00000621095 3306 ntBASIC10.86□□□□□ -0.67
NICN1Q9BSH3 CNTROB-201ENST00000380262 3769 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
NICN1Q9BSH3 FBXW11-201ENST00000265094 4342 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
NICN1Q9BSH3 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
NICN1Q9BSH3 DLG5-201ENST00000372391 7415 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
NICN1Q9BSH3 ALDH3A2-203ENST00000395575 3640 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
NICN1Q9BSH3 FXR1-220ENST00000491062 1768 ntTSL 2 BASIC10.85□□□□□ -0.67
NICN1Q9BSH3 PTPN11-205ENST00000635625 1794 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
NICN1Q9BSH3 MAGEB1-201ENST00000378981 1866 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
NICN1Q9BSH3 PROS1-202ENST00000394236 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
NICN1Q9BSH3 PKM-202ENST00000335181 2318 ntAPPRIS ALT1 TSL 1 (best) BASIC10.85□□□□□ -0.67
NICN1Q9BSH3 ZNF423-207ENST00000567169 4017 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
NICN1Q9BSH3 MATR3-227ENST00000618441 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
NICN1Q9BSH3 KIAA0556-201ENST00000261588 6616 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
NICN1Q9BSH3 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
NICN1Q9BSH3 EEF1G-201ENST00000329251 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
NICN1Q9BSH3 WIPF1-204ENST00000392547 4587 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
NICN1Q9BSH3 IGSF3-203ENST00000369486 7254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
NICN1Q9BSH3 C11orf1-201ENST00000260276 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
NICN1Q9BSH3 EIF3C-204ENST00000564243 2870 ntTSL 2 BASIC10.85□□□□□ -0.67
NICN1Q9BSH3 COPS5-203ENST00000517736 1621 ntTSL 5 BASIC10.85□□□□□ -0.67
NICN1Q9BSH3 NUTM2B-202ENST00000372321 3970 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
NICN1Q9BSH3 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
NICN1Q9BSH3 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
NICN1Q9BSH3 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC10.85□□□□□ -0.67
NICN1Q9BSH3 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
NICN1Q9BSH3 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
NICN1Q9BSH3 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
NICN1Q9BSH3 HLA-DQB2-229ENST00000411527 1059 ntBASIC10.85□□□□□ -0.67
NICN1Q9BSH3 KRT18P39-201ENST00000415349 1299 ntBASIC10.85□□□□□ -0.67
NICN1Q9BSH3 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
NICN1Q9BSH3 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC10.85□□□□□ -0.67
NICN1Q9BSH3 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC10.85□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms