Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
NICN1Q9BSH3 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
NICN1Q9BSH3 AC026316.1-201ENST00000398900 414 ntBASIC10.88□□□□□ -0.67
NICN1Q9BSH3 AC092506.1-202ENST00000401022 528 ntBASIC10.88□□□□□ -0.67
NICN1Q9BSH3 OR7E155P-201ENST00000412208 1014 ntBASIC10.88□□□□□ -0.67
NICN1Q9BSH3 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC10.88□□□□□ -0.67
NICN1Q9BSH3 PSAT1P2-201ENST00000426107 972 ntBASIC10.88□□□□□ -0.67
NICN1Q9BSH3 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC10.88□□□□□ -0.67
NICN1Q9BSH3 TMEM107-205ENST00000449985 1210 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
NICN1Q9BSH3 AC004969.1-201ENST00000471553 578 ntTSL 5 BASIC10.88□□□□□ -0.67
NICN1Q9BSH3 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC10.88□□□□□ -0.67
NICN1Q9BSH3 AL662899.2-201ENST00000503322 1266 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
NICN1Q9BSH3 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC10.88□□□□□ -0.67
NICN1Q9BSH3 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
NICN1Q9BSH3 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC10.88□□□□□ -0.67
NICN1Q9BSH3 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
NICN1Q9BSH3 ANAPC15-209ENST00000538919 849 ntAPPRIS P3 TSL 3 BASIC10.88□□□□□ -0.67
NICN1Q9BSH3 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
NICN1Q9BSH3 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC10.88□□□□□ -0.67
NICN1Q9BSH3 AC103876.1-203ENST00000565495 290 ntTSL 5 BASIC10.88□□□□□ -0.67
NICN1Q9BSH3 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC10.88□□□□□ -0.67
NICN1Q9BSH3 MIR5091-201ENST00000578707 93 ntBASIC10.88□□□□□ -0.67
NICN1Q9BSH3 TRMT112P3-201ENST00000580149 358 ntBASIC10.88□□□□□ -0.67
NICN1Q9BSH3 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC10.88□□□□□ -0.67
NICN1Q9BSH3 ETV2-207ENST00000619399 994 ntTSL 5 BASIC10.88□□□□□ -0.67
NICN1Q9BSH3 LINC02340-202ENST00000620494 573 ntTSL 4 BASIC10.88□□□□□ -0.67
NICN1Q9BSH3 AC073911.3-201ENST00000624401 631 ntBASIC10.88□□□□□ -0.67
NICN1Q9BSH3 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
NICN1Q9BSH3 AL592528.1-201ENST00000380008 3466 ntTSL 2 BASIC10.88□□□□□ -0.67
NICN1Q9BSH3 GRID1-201ENST00000327946 5834 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
NICN1Q9BSH3 DOK4-210ENST00000566936 2851 ntTSL 3 BASIC10.88□□□□□ -0.67
NICN1Q9BSH3 KCNH1-201ENST00000271751 8172 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
NICN1Q9BSH3 SEC24A-201ENST00000322887 2700 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
NICN1Q9BSH3 CA14-201ENST00000369111 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
NICN1Q9BSH3 RFC5-201ENST00000392542 2449 ntTSL 2 BASIC10.88□□□□□ -0.67
NICN1Q9BSH3 BCOR-202ENST00000378444 6358 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
NICN1Q9BSH3 RAB43-205ENST00000393308 4193 ntAPPRIS P1 TSL 4 BASIC10.88□□□□□ -0.67
NICN1Q9BSH3 TARDBP-202ENST00000315091 1835 ntTSL 5 BASIC10.88□□□□□ -0.67
NICN1Q9BSH3 AL133464.1-205ENST00000634595 1535 ntTSL 5 BASIC10.88□□□□□ -0.67
NICN1Q9BSH3 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
NICN1Q9BSH3 PLEKHG5-208ENST00000400915 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
NICN1Q9BSH3 RGS9-203ENST00000449996 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
NICN1Q9BSH3 DGCR11-201ENST00000609958 2214 ntBASIC10.88□□□□□ -0.67
NICN1Q9BSH3 SP3-201ENST00000310015 6359 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
NICN1Q9BSH3 HERC6-203ENST00000380265 3781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
NICN1Q9BSH3 SMARCAD1-204ENST00000457823 4649 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
NICN1Q9BSH3 NSD3-202ENST00000317025 10776 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
NICN1Q9BSH3 CLUHP8-201ENST00000547527 1485 ntBASIC10.87□□□□□ -0.67
NICN1Q9BSH3 TPCN1-204ENST00000541517 5173 ntTSL 5 BASIC10.87□□□□□ -0.67
NICN1Q9BSH3 SORBS2-203ENST00000319471 2824 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
NICN1Q9BSH3 SPRY2-202ENST00000377104 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
NICN1Q9BSH3 GRM4-205ENST00000538487 4153 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
NICN1Q9BSH3 UBASH3A-202ENST00000319294 2504 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
NICN1Q9BSH3 TPX2-201ENST00000300403 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
NICN1Q9BSH3 ALDH8A1-203ENST00000367845 2383 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
NICN1Q9BSH3 NOSTRIN-203ENST00000397209 1437 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
NICN1Q9BSH3 RNF130-207ENST00000522208 9945 ntTSL 5 BASIC10.87□□□□□ -0.67
NICN1Q9BSH3 SLC45A4-203ENST00000519067 7483 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
NICN1Q9BSH3 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC10.87□□□□□ -0.67
NICN1Q9BSH3 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
NICN1Q9BSH3 TEPP-201ENST00000290871 1079 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
NICN1Q9BSH3 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
NICN1Q9BSH3 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
NICN1Q9BSH3 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC10.87□□□□□ -0.67
NICN1Q9BSH3 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC10.87□□□□□ -0.67
NICN1Q9BSH3 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC10.87□□□□□ -0.67
NICN1Q9BSH3 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC10.87□□□□□ -0.67
NICN1Q9BSH3 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
NICN1Q9BSH3 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
NICN1Q9BSH3 PRADC1P1-201ENST00000412317 525 ntBASIC10.87□□□□□ -0.67
NICN1Q9BSH3 AC007274.1-201ENST00000439805 662 ntBASIC10.87□□□□□ -0.67
NICN1Q9BSH3 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC10.87□□□□□ -0.67
NICN1Q9BSH3 EEF1DP6-201ENST00000449232 372 ntBASIC10.87□□□□□ -0.67
NICN1Q9BSH3 GNG10P1-201ENST00000452289 199 ntBASIC10.87□□□□□ -0.67
NICN1Q9BSH3 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
NICN1Q9BSH3 PPIA-208ENST00000489459 907 ntTSL 2 BASIC10.87□□□□□ -0.67
NICN1Q9BSH3 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC10.87□□□□□ -0.67
NICN1Q9BSH3 AC106872.8-201ENST00000507651 684 ntBASIC10.87□□□□□ -0.67
NICN1Q9BSH3 AC010267.1-201ENST00000508636 553 ntTSL 4 BASIC10.87□□□□□ -0.67
NICN1Q9BSH3 MRPL51-205ENST00000543164 814 ntTSL 2 BASIC10.87□□□□□ -0.67
NICN1Q9BSH3 MRPL51-206ENST00000543703 441 ntTSL 3 BASIC10.87□□□□□ -0.67
NICN1Q9BSH3 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC10.87□□□□□ -0.67
NICN1Q9BSH3 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC10.87□□□□□ -0.67
NICN1Q9BSH3 MT2A-202ENST00000561491 581 ntTSL 2 BASIC10.87□□□□□ -0.67
NICN1Q9BSH3 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC10.87□□□□□ -0.67
NICN1Q9BSH3 PPIA-210ENST00000620047 827 ntTSL 5 BASIC10.87□□□□□ -0.67
NICN1Q9BSH3 YRDCP1-201ENST00000621419 643 ntBASIC10.87□□□□□ -0.67
NICN1Q9BSH3 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC10.87□□□□□ -0.67
NICN1Q9BSH3 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC10.87□□□□□ -0.67
NICN1Q9BSH3 PIGB-202ENST00000539642 1668 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
NICN1Q9BSH3 VCL-202ENST00000372755 6489 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
NICN1Q9BSH3 EXD2-201ENST00000312994 5107 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
NICN1Q9BSH3 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC10.87□□□□□ -0.67
NICN1Q9BSH3 NTM-221ENST00000539799 2550 ntTSL 5 BASIC10.87□□□□□ -0.67
NICN1Q9BSH3 TIGAR-204ENST00000635110 3633 ntTSL 5 BASIC10.87□□□□□ -0.67
NICN1Q9BSH3 HAUS5-201ENST00000203166 4283 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
NICN1Q9BSH3 ZNF582-201ENST00000301310 2824 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
NICN1Q9BSH3 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
NICN1Q9BSH3 BSDC1-209ENST00000526031 1361 ntTSL 2 BASIC10.87□□□□□ -0.67
NICN1Q9BSH3 PRDM7-202ENST00000449207 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms