Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 AC005682.1-201ENST00000452069 1467 ntBASIC13.22□□□□□ -0.29
MTHFRP42898 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
MTHFRP42898 R3HDM2-215ENST00000634871 4092 ntTSL 5 BASIC13.22□□□□□ -0.29
MTHFRP42898 MPI-208ENST00000563786 1707 ntTSL 5 BASIC13.22□□□□□ -0.29
MTHFRP42898 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
MTHFRP42898 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
MTHFRP42898 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MTHFRP42898 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
MTHFRP42898 C2-209ENST00000452323 1999 ntTSL 2 BASIC13.21□□□□□ -0.29
MTHFRP42898 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
MTHFRP42898 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
MTHFRP42898 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
MTHFRP42898 PRKAG1-201ENST00000316299 1683 ntTSL 2 BASIC13.21□□□□□ -0.29
MTHFRP42898 CXorf40B-203ENST00000370406 1653 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
MTHFRP42898 ARRB2-207ENST00000571206 1659 ntTSL 5 BASIC13.21□□□□□ -0.29
MTHFRP42898 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
MTHFRP42898 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC13.21□□□□□ -0.29
MTHFRP42898 TGM5-207ENST00000622115 2202 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
MTHFRP42898 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
MTHFRP42898 AC104590.1-202ENST00000558368 1921 ntBASIC13.21□□□□□ -0.29
MTHFRP42898 ZSCAN29-207ENST00000568898 1389 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
MTHFRP42898 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC13.21□□□□□ -0.29
MTHFRP42898 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC13.21□□□□□ -0.29
MTHFRP42898 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
MTHFRP42898 C16orf46-202ENST00000378611 1857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
MTHFRP42898 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
MTHFRP42898 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
MTHFRP42898 EPS8L3-201ENST00000361852 2130 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
MTHFRP42898 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
MTHFRP42898 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
MTHFRP42898 CCDC149-208ENST00000635206 2362 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
MTHFRP42898 C10orf128-203ENST00000374153 1569 ntAPPRIS ALT2 TSL 3 BASIC13.21□□□□□ -0.29
MTHFRP42898 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
MTHFRP42898 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC13.21□□□□□ -0.29
MTHFRP42898 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
MTHFRP42898 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC13.21□□□□□ -0.29
MTHFRP42898 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
MTHFRP42898 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
MTHFRP42898 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
MTHFRP42898 PMF1-BGLAP-201ENST00000320139 773 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
MTHFRP42898 PRDX4-201ENST00000379331 852 ntTSL 2 BASIC13.21□□□□□ -0.29
MTHFRP42898 DMKN-203ENST00000402589 935 ntAPPRIS ALT2 TSL 3 BASIC13.21□□□□□ -0.29
MTHFRP42898 CYTH4-202ENST00000402997 633 ntTSL 4 BASIC13.21□□□□□ -0.29
MTHFRP42898 AL121761.1-203ENST00000426012 677 ntTSL 3 BASIC13.21□□□□□ -0.29
MTHFRP42898 AC112492.3-201ENST00000457557 1031 ntBASIC13.21□□□□□ -0.29
MTHFRP42898 RN7SL225P-201ENST00000464648 298 ntBASIC13.21□□□□□ -0.29
MTHFRP42898 MIOXP1-201ENST00000521205 835 ntBASIC13.21□□□□□ -0.29
MTHFRP42898 MNAT1-202ENST00000539616 1220 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
MTHFRP42898 ZNF720-211ENST00000539915 837 ntTSL 3 BASIC13.21□□□□□ -0.29
MTHFRP42898 KRT18P7-201ENST00000557241 1219 ntBASIC13.21□□□□□ -0.29
MTHFRP42898 AL162464.2-201ENST00000557761 526 ntTSL 4 BASIC13.21□□□□□ -0.29
MTHFRP42898 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC13.21□□□□□ -0.29
MTHFRP42898 SKAP1-AS1-201ENST00000582246 687 ntTSL 2 BASIC13.21□□□□□ -0.29
MTHFRP42898 AC090844.3-201ENST00000583462 784 ntTSL 3 BASIC13.21□□□□□ -0.29
MTHFRP42898 AC016590.1-201ENST00000588763 420 ntTSL 2 BASIC13.21□□□□□ -0.29
MTHFRP42898 MXRA7-206ENST00000589082 560 ntAPPRIS ALT2 TSL 4 BASIC13.21□□□□□ -0.29
MTHFRP42898 BID-211ENST00000611040 419 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
MTHFRP42898 GH2-205ENST00000622506 702 ntTSL 5 BASIC13.21□□□□□ -0.29
MTHFRP42898 AC091941.1-201ENST00000623003 576 ntBASIC13.21□□□□□ -0.29
MTHFRP42898 PUDPP2-202ENST00000628080 737 ntTSL 5 BASIC13.21□□□□□ -0.29
MTHFRP42898 AC127526.5-201ENST00000637148 1110 ntBASIC13.21□□□□□ -0.29
MTHFRP42898 AC092471.2-201ENST00000637219 651 ntBASIC13.21□□□□□ -0.29
MTHFRP42898 CEP70-208ENST00000474781 2028 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
MTHFRP42898 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
MTHFRP42898 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
MTHFRP42898 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
MTHFRP42898 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
MTHFRP42898 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
MTHFRP42898 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC13.21□□□□□ -0.3
MTHFRP42898 AC022364.1-202ENST00000617468 2409 ntBASIC13.21□□□□□ -0.3
MTHFRP42898 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
MTHFRP42898 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
MTHFRP42898 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC13.21□□□□□ -0.3
MTHFRP42898 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
MTHFRP42898 CHMP4C-201ENST00000297265 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
MTHFRP42898 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MTHFRP42898 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC13.2□□□□□ -0.3
MTHFRP42898 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
MTHFRP42898 BAIAP3-207ENST00000562208 3663 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
MTHFRP42898 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
MTHFRP42898 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
MTHFRP42898 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
MTHFRP42898 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
MTHFRP42898 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
MTHFRP42898 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
MTHFRP42898 ATCAY-205ENST00000600960 2904 ntTSL 5 BASIC13.2□□□□□ -0.3
MTHFRP42898 AC015819.3-201ENST00000624305 2674 ntBASIC13.2□□□□□ -0.3
MTHFRP42898 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
MTHFRP42898 TRNAU1AP-201ENST00000373830 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MTHFRP42898 EHMT2-203ENST00000375537 3965 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
MTHFRP42898 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
MTHFRP42898 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC13.2□□□□□ -0.3
MTHFRP42898 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
MTHFRP42898 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MTHFRP42898 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MTHFRP42898 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
MTHFRP42898 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MTHFRP42898 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
MTHFRP42898 BPIFB9P-201ENST00000246222 1178 ntBASIC13.2□□□□□ -0.3
MTHFRP42898 SRSF10-205ENST00000374452 1194 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms