Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC215524.1-201ENST00000635696 241 ntBASIC13.25□□□□□ -0.29
SLC1A1P43005 ZNF274-201ENST00000326804 2447 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SLC1A1P43005 EME1-207ENST00000511648 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SLC1A1P43005 SLC38A7-215ENST00000570101 4549 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SLC1A1P43005 LRSAM1-202ENST00000323301 3376 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
SLC1A1P43005 ZNF75D-202ENST00000370766 5592 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SLC1A1P43005 PAX3-202ENST00000336840 2038 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SLC1A1P43005 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC13.25□□□□□ -0.29
SLC1A1P43005 ZNF773-205ENST00000599847 5832 ntTSL 2 BASIC13.25□□□□□ -0.29
SLC1A1P43005 C10orf105-202ENST00000441508 4836 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SLC1A1P43005 COX6B2-205ENST00000588572 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SLC1A1P43005 HERC6-201ENST00000264346 3779 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SLC1A1P43005 AC020928.1-201ENST00000590750 1850 ntTSL 2 BASIC13.25□□□□□ -0.29
SLC1A1P43005 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SLC1A1P43005 PCDHAC1-201ENST00000253807 5299 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SLC1A1P43005 FLJ37035-202ENST00000423178 2600 ntTSL 2 BASIC13.25□□□□□ -0.29
SLC1A1P43005 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SLC1A1P43005 SPATA2-202ENST00000422556 4138 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
SLC1A1P43005 CDX2-201ENST00000381020 4053 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SLC1A1P43005 KCNH6-201ENST00000314672 3062 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
SLC1A1P43005 GOLGA6L4-203ENST00000510439 4563 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
SLC1A1P43005 AL050341.2-201ENST00000567508 1541 ntBASIC13.24□□□□□ -0.29
SLC1A1P43005 TUFT1-202ENST00000368848 3033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SLC1A1P43005 Z97192.3-201ENST00000420902 2975 ntTSL 2 BASIC13.24□□□□□ -0.29
SLC1A1P43005 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SLC1A1P43005 MPZL3-204ENST00000527472 1381 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SLC1A1P43005 LMX1A-203ENST00000367893 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SLC1A1P43005 KLHL38-201ENST00000325995 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SLC1A1P43005 LIMK1-201ENST00000336180 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SLC1A1P43005 CHGB-201ENST00000378961 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SLC1A1P43005 SPIN1-201ENST00000375859 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SLC1A1P43005 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SLC1A1P43005 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SLC1A1P43005 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
SLC1A1P43005 IL1RN-205ENST00000409930 848 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SLC1A1P43005 KRT18P44-201ENST00000416086 1285 ntBASIC13.24□□□□□ -0.29
SLC1A1P43005 HCG27-204ENST00000424675 895 ntTSL 3 BASIC13.24□□□□□ -0.29
SLC1A1P43005 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC13.24□□□□□ -0.29
SLC1A1P43005 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC13.24□□□□□ -0.29
SLC1A1P43005 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC13.24□□□□□ -0.29
SLC1A1P43005 AC092862.1-201ENST00000541534 533 ntBASIC13.24□□□□□ -0.29
SLC1A1P43005 AL391832.3-201ENST00000549744 846 ntTSL 3 BASIC13.24□□□□□ -0.29
SLC1A1P43005 LINC02328-202ENST00000554647 522 ntTSL 4 BASIC13.24□□□□□ -0.29
SLC1A1P43005 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC13.24□□□□□ -0.29
SLC1A1P43005 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC13.24□□□□□ -0.29
SLC1A1P43005 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC13.24□□□□□ -0.29
SLC1A1P43005 MFAP4-201ENST00000299610 1873 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SLC1A1P43005 MFAP4-203ENST00000497081 1876 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SLC1A1P43005 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SLC1A1P43005 TMCO4-202ENST00000375127 2403 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SLC1A1P43005 OVOL1-201ENST00000335987 3034 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SLC1A1P43005 ZNF140-202ENST00000355557 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SLC1A1P43005 GNAS-214ENST00000371100 4029 ntTSL 5 BASIC13.24□□□□□ -0.29
SLC1A1P43005 LINC00477-201ENST00000483544 1710 ntTSL 2 BASIC13.24□□□□□ -0.29
SLC1A1P43005 AMPD2-203ENST00000358729 2838 ntTSL 2 BASIC13.24□□□□□ -0.29
SLC1A1P43005 AC007622.2-202ENST00000546714 1680 ntTSL 2 BASIC13.24□□□□□ -0.29
SLC1A1P43005 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SLC1A1P43005 TNFSF10-202ENST00000420541 1619 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SLC1A1P43005 CDH1-212ENST00000611625 4878 ntTSL 5 BASIC13.24□□□□□ -0.29
SLC1A1P43005 C1RL-AS1-201ENST00000382215 2086 ntTSL 2 BASIC13.24□□□□□ -0.29
SLC1A1P43005 SEPT10-202ENST00000397712 3071 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SLC1A1P43005 MYO9B-206ENST00000595618 7623 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SLC1A1P43005 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
SLC1A1P43005 MDGA1-207ENST00000505425 3021 ntTSL 5 BASIC13.23□□□□□ -0.29
SLC1A1P43005 LBP-201ENST00000217407 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SLC1A1P43005 ABAT-201ENST00000268251 4836 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SLC1A1P43005 OLFML3-202ENST00000369551 1934 ntTSL 2 BASIC13.23□□□□□ -0.29
SLC1A1P43005 AC008966.1-201ENST00000502171 2367 ntTSL 2 BASIC13.23□□□□□ -0.29
SLC1A1P43005 TROVE2-203ENST00000367444 1857 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SLC1A1P43005 AIF1L-204ENST00000372300 3284 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SLC1A1P43005 CELF3-202ENST00000290585 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SLC1A1P43005 ANXA4-201ENST00000394295 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SLC1A1P43005 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SLC1A1P43005 MROH7-TTC4-201ENST00000414150 5867 ntAPPRIS P5 TSL 2 BASIC13.23□□□□□ -0.29
SLC1A1P43005 AL590483.3-201ENST00000623669 3580 ntBASIC13.23□□□□□ -0.29
SLC1A1P43005 PAX9-202ENST00000402703 3104 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
SLC1A1P43005 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SLC1A1P43005 AL807752.1-201ENST00000395082 1322 ntBASIC13.23□□□□□ -0.29
SLC1A1P43005 AL627309.3-201ENST00000495576 1319 ntTSL 5 BASIC13.23□□□□□ -0.29
SLC1A1P43005 AC109326.1-201ENST00000624705 1321 ntBASIC13.23□□□□□ -0.29
SLC1A1P43005 PARN-203ENST00000437198 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SLC1A1P43005 CAPN1-208ENST00000527323 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SLC1A1P43005 SPATS2L-208ENST00000409718 2648 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SLC1A1P43005 CIC-204ENST00000572681 8218 ntTSL 5 BASIC13.23□□□□□ -0.29
SLC1A1P43005 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SLC1A1P43005 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
SLC1A1P43005 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SLC1A1P43005 HNRNPA1P25-201ENST00000422644 937 ntBASIC13.23□□□□□ -0.29
SLC1A1P43005 RPL18AP16-201ENST00000424057 531 ntBASIC13.23□□□□□ -0.29
SLC1A1P43005 AP000346.2-202ENST00000425948 383 ntBASIC13.23□□□□□ -0.29
SLC1A1P43005 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC13.23□□□□□ -0.29
SLC1A1P43005 AL662860.1-201ENST00000436804 877 ntTSL 5 BASIC13.23□□□□□ -0.29
SLC1A1P43005 RPSAP16-201ENST00000447583 821 ntBASIC13.23□□□□□ -0.29
SLC1A1P43005 TULP3P1-202ENST00000453253 1291 ntBASIC13.23□□□□□ -0.29
SLC1A1P43005 RPS2P36-201ENST00000456516 831 ntBASIC13.23□□□□□ -0.29
SLC1A1P43005 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC13.23□□□□□ -0.29
SLC1A1P43005 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC13.23□□□□□ -0.29
SLC1A1P43005 DERL1-204ENST00000519018 575 ntTSL 4 BASIC13.23□□□□□ -0.29
SLC1A1P43005 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC13.23□□□□□ -0.29
SLC1A1P43005 C8orf37-AS1-203ENST00000521905 617 ntTSL 5 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms