Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 GK-203ENST00000378943 3707 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MTHFRP42898 SON-203ENST00000381679 7860 ntTSL 5 BASIC13.25□□□□□ -0.29
MTHFRP42898 PABPC1L-207ENST00000372824 2223 ntTSL 2 BASIC13.25□□□□□ -0.29
MTHFRP42898 CACNA1C-AS1-201ENST00000501371 2191 ntTSL 2 BASIC13.25□□□□□ -0.29
MTHFRP42898 AC139491.6-202ENST00000637171 2077 ntBASIC13.25□□□□□ -0.29
MTHFRP42898 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
MTHFRP42898 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MTHFRP42898 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC13.25□□□□□ -0.29
MTHFRP42898 USP14-208ENST00000582707 1803 ntTSL 5 BASIC13.25□□□□□ -0.29
MTHFRP42898 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MTHFRP42898 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MTHFRP42898 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MTHFRP42898 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MTHFRP42898 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MTHFRP42898 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC13.24□□□□□ -0.29
MTHFRP42898 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
MTHFRP42898 AC026725.1-201ENST00000511327 1588 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
MTHFRP42898 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC13.24□□□□□ -0.29
MTHFRP42898 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MTHFRP42898 SCARB2-202ENST00000452464 1495 ntTSL 2 BASIC13.24□□□□□ -0.29
MTHFRP42898 AP000925.1-201ENST00000425960 1449 ntBASIC13.24□□□□□ -0.29
MTHFRP42898 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MTHFRP42898 AP003063.2-201ENST00000525984 2067 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
MTHFRP42898 GMPS-201ENST00000295920 2024 ntTSL 2 BASIC13.24□□□□□ -0.29
MTHFRP42898 GZMH-201ENST00000216338 909 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MTHFRP42898 C16orf78-201ENST00000299191 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MTHFRP42898 HIST1H1C-201ENST00000343677 642 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
MTHFRP42898 RN7SKP245-201ENST00000364025 320 ntBASIC13.24□□□□□ -0.29
MTHFRP42898 SUMF1-203ENST00000405420 1128 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
MTHFRP42898 MACROD2-204ENST00000407045 727 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
MTHFRP42898 GALM-202ENST00000410063 1023 ntTSL 3 BASIC13.24□□□□□ -0.29
MTHFRP42898 RN7SKP218-201ENST00000410222 292 ntBASIC13.24□□□□□ -0.29
MTHFRP42898 LINC01849-201ENST00000414647 517 ntTSL 4 BASIC13.24□□□□□ -0.29
MTHFRP42898 AC017081.1-201ENST00000420063 823 ntBASIC13.24□□□□□ -0.29
MTHFRP42898 AC074389.2-201ENST00000421380 437 ntTSL 3 BASIC13.24□□□□□ -0.29
MTHFRP42898 RPSAP46-201ENST00000428316 882 ntBASIC13.24□□□□□ -0.29
MTHFRP42898 AC106017.1-201ENST00000428348 440 ntTSL 2 BASIC13.24□□□□□ -0.29
MTHFRP42898 LINC00106-201ENST00000430235 370 ntTSL 2 BASIC13.24□□□□□ -0.29
MTHFRP42898 HUS1-202ENST00000432325 1125 ntTSL 5 BASIC13.24□□□□□ -0.29
MTHFRP42898 TUSC8-201ENST00000432701 978 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
MTHFRP42898 MRO-205ENST00000436348 1125 ntTSL 5 BASIC13.24□□□□□ -0.29
MTHFRP42898 ZFR2-203ENST00000439086 870 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
MTHFRP42898 SCLT1-202ENST00000439369 966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
MTHFRP42898 AC007952.3-201ENST00000442355 440 ntTSL 2 BASIC13.24□□□□□ -0.29
MTHFRP42898 AL592463.1-201ENST00000451108 635 ntTSL 3 BASIC13.24□□□□□ -0.29
MTHFRP42898 AL110503.1-201ENST00000457224 534 ntTSL 3 BASIC13.24□□□□□ -0.29
MTHFRP42898 AL390061.1-201ENST00000457804 293 ntTSL 2 BASIC13.24□□□□□ -0.29
MTHFRP42898 AC007952.8-202ENST00000495691 440 ntTSL 2 BASIC13.24□□□□□ -0.29
MTHFRP42898 AC027290.1-201ENST00000537827 484 ntTSL 5 BASIC13.24□□□□□ -0.29
MTHFRP42898 KRTAP2-2-202ENST00000542910 390 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
MTHFRP42898 AL132780.2-203ENST00000555294 589 ntTSL 4 BASIC13.24□□□□□ -0.29
MTHFRP42898 AC005154.1-202ENST00000578293 999 ntTSL 5 BASIC13.24□□□□□ -0.29
MTHFRP42898 AC091588.2-201ENST00000578741 366 ntTSL 3 BASIC13.24□□□□□ -0.29
MTHFRP42898 ZNF544-209ENST00000596929 543 ntTSL 4 BASIC13.24□□□□□ -0.29
MTHFRP42898 SIGLEC21P-201ENST00000598990 1010 ntBASIC13.24□□□□□ -0.29
MTHFRP42898 KXD1-210ENST00000599000 498 ntTSL 2 BASIC13.24□□□□□ -0.29
MTHFRP42898 AC092301.1-201ENST00000601618 764 ntTSL 5 BASIC13.24□□□□□ -0.29
MTHFRP42898 AC112236.2-201ENST00000608402 845 ntBASIC13.24□□□□□ -0.29
MTHFRP42898 AL590491.2-202ENST00000611126 418 ntTSL 5 BASIC13.24□□□□□ -0.29
MTHFRP42898 LINC00969-263ENST00000626007 839 ntTSL 5 BASIC13.24□□□□□ -0.29
MTHFRP42898 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
MTHFRP42898 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
MTHFRP42898 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
MTHFRP42898 HMGB1-202ENST00000339872 2319 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
MTHFRP42898 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MTHFRP42898 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC13.24□□□□□ -0.29
MTHFRP42898 PPP1R11-204ENST00000376769 1689 ntTSL 2 BASIC13.24□□□□□ -0.29
MTHFRP42898 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MTHFRP42898 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC13.24□□□□□ -0.29
MTHFRP42898 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MTHFRP42898 RHBDL2-201ENST00000289248 2129 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
MTHFRP42898 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
MTHFRP42898 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
MTHFRP42898 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
MTHFRP42898 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MTHFRP42898 TOP1MT-213ENST00000521193 1960 ntTSL 2 BASIC13.23□□□□□ -0.29
MTHFRP42898 MKL1-210ENST00000614754 3917 ntTSL 5 BASIC13.23□□□□□ -0.29
MTHFRP42898 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
MTHFRP42898 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC13.23□□□□□ -0.29
MTHFRP42898 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC13.23□□□□□ -0.29
MTHFRP42898 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC13.23□□□□□ -0.29
MTHFRP42898 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
MTHFRP42898 TRIM60-201ENST00000341062 1867 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
MTHFRP42898 ACAD11-204ENST00000481970 1891 ntTSL 5 BASIC13.23□□□□□ -0.29
MTHFRP42898 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
MTHFRP42898 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
MTHFRP42898 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC13.23□□□□□ -0.29
MTHFRP42898 AL590552.1-201ENST00000623164 1770 ntBASIC13.23□□□□□ -0.29
MTHFRP42898 CACNA2D2-202ENST00000360963 5272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
MTHFRP42898 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MTHFRP42898 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
MTHFRP42898 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MTHFRP42898 OR6N1-201ENST00000335094 1027 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
MTHFRP42898 HLA-DRA-202ENST00000395388 1280 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
MTHFRP42898 HNRNPA1P24-201ENST00000476029 1046 ntBASIC13.23□□□□□ -0.29
MTHFRP42898 MYLK-AS1-203ENST00000485162 587 ntTSL 4 BASIC13.23□□□□□ -0.29
MTHFRP42898 LINC02163-201ENST00000514769 574 ntTSL 4 BASIC13.23□□□□□ -0.29
MTHFRP42898 AC078925.1-201ENST00000535370 568 ntTSL 2 BASIC13.23□□□□□ -0.29
MTHFRP42898 AC006236.1-201ENST00000576249 797 ntBASIC13.23□□□□□ -0.29
MTHFRP42898 C17orf62-210ENST00000577732 1053 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms