Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
MTHFRP42898 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
MTHFRP42898 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
MTHFRP42898 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
MTHFRP42898 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
MTHFRP42898 OR4C6-201ENST00000314259 1020 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
MTHFRP42898 AL121949.1-201ENST00000402043 968 ntBASIC13.28□□□□□ -0.28
MTHFRP42898 WSB1-203ENST00000427287 1149 ntTSL 2 BASIC13.28□□□□□ -0.28
MTHFRP42898 MIR646HG-204ENST00000427820 805 ntTSL 5 BASIC13.28□□□□□ -0.28
MTHFRP42898 HTR3D-203ENST00000428798 1215 ntTSL 5 BASIC13.28□□□□□ -0.28
MTHFRP42898 CYP2F2P-201ENST00000437853 1056 ntBASIC13.28□□□□□ -0.28
MTHFRP42898 HTR3D-204ENST00000453435 1043 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
MTHFRP42898 LINC01524-202ENST00000454600 745 ntTSL 3 BASIC13.28□□□□□ -0.28
MTHFRP42898 AC091057.1-201ENST00000501830 970 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
MTHFRP42898 SAP30L-AS1-202ENST00000519727 396 ntTSL 3 BASIC13.28□□□□□ -0.28
MTHFRP42898 AC025257.1-201ENST00000550926 375 ntTSL 3 BASIC13.28□□□□□ -0.28
MTHFRP42898 AL133297.2-201ENST00000563162 485 ntTSL 2 BASIC13.28□□□□□ -0.28
MTHFRP42898 AC015563.2-201ENST00000579580 772 ntTSL 3 BASIC13.28□□□□□ -0.28
MTHFRP42898 GDPD1-205ENST00000581140 1265 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
MTHFRP42898 WSB1-213ENST00000583193 552 ntTSL 4 BASIC13.28□□□□□ -0.28
MTHFRP42898 ZNF551-202ENST00000596085 469 ntTSL 2 BASIC13.28□□□□□ -0.28
MTHFRP42898 AC092471.1-202ENST00000637160 999 ntBASIC13.28□□□□□ -0.28
MTHFRP42898 VPS26A-203ENST00000395098 2554 ntTSL 5 BASIC13.28□□□□□ -0.28
MTHFRP42898 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
MTHFRP42898 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
MTHFRP42898 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
MTHFRP42898 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
MTHFRP42898 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
MTHFRP42898 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
MTHFRP42898 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC13.28□□□□□ -0.28
MTHFRP42898 THEMIS3P-201ENST00000416112 1586 ntBASIC13.28□□□□□ -0.28
MTHFRP42898 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC13.28□□□□□ -0.28
MTHFRP42898 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
MTHFRP42898 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
MTHFRP42898 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
MTHFRP42898 AL138762.1-201ENST00000608554 1637 ntBASIC13.28□□□□□ -0.28
MTHFRP42898 OS9-203ENST00000389142 2457 ntTSL 5 BASIC13.28□□□□□ -0.28
MTHFRP42898 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
MTHFRP42898 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
MTHFRP42898 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
MTHFRP42898 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
MTHFRP42898 CYP4F12-201ENST00000324632 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
MTHFRP42898 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
MTHFRP42898 PES1P1-201ENST00000508165 1736 ntBASIC13.27□□□□□ -0.28
MTHFRP42898 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
MTHFRP42898 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC13.27□□□□□ -0.28
MTHFRP42898 GPM6B-203ENST00000356942 1830 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
MTHFRP42898 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.28
MTHFRP42898 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
MTHFRP42898 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
MTHFRP42898 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
MTHFRP42898 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
MTHFRP42898 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
MTHFRP42898 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
MTHFRP42898 CAST-206ENST00000395812 4506 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
MTHFRP42898 MLPH-202ENST00000338530 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
MTHFRP42898 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
MTHFRP42898 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC13.27□□□□□ -0.29
MTHFRP42898 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
MTHFRP42898 HRH2-201ENST00000231683 1080 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
MTHFRP42898 CCDC70-201ENST00000242819 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
MTHFRP42898 CHMP2A-201ENST00000312547 913 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
MTHFRP42898 LMO1-201ENST00000335790 1279 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
MTHFRP42898 RIPPLY2-201ENST00000369687 521 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
MTHFRP42898 NR0B1-201ENST00000378963 475 ntTSL 2 BASIC13.27□□□□□ -0.29
MTHFRP42898 MPDU1-203ENST00000396501 1125 ntTSL 2 BASIC13.27□□□□□ -0.29
MTHFRP42898 AC083873.1-201ENST00000421179 1099 ntBASIC13.27□□□□□ -0.29
MTHFRP42898 LINC01508-201ENST00000425666 1013 ntTSL 3 BASIC13.27□□□□□ -0.29
MTHFRP42898 AC005838.1-201ENST00000430712 233 ntBASIC13.27□□□□□ -0.29
MTHFRP42898 SNCA-208ENST00000505199 411 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
MTHFRP42898 SPATA24-204ENST00000507779 606 ntTSL 5 BASIC13.27□□□□□ -0.29
MTHFRP42898 LMO1-204ENST00000534484 770 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
MTHFRP42898 AP001453.2-201ENST00000544553 391 ntTSL 2 BASIC13.27□□□□□ -0.29
MTHFRP42898 AL139022.1-202ENST00000553633 796 ntTSL 2 BASIC13.27□□□□□ -0.29
MTHFRP42898 AC021755.2-201ENST00000559022 461 ntTSL 5 BASIC13.27□□□□□ -0.29
MTHFRP42898 SMIM6-202ENST00000579469 957 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
MTHFRP42898 AC091132.3-201ENST00000579701 470 ntBASIC13.27□□□□□ -0.29
MTHFRP42898 AC138645.1-201ENST00000582765 470 ntBASIC13.27□□□□□ -0.29
MTHFRP42898 LINC00868-203ENST00000592919 853 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
MTHFRP42898 CHMP2A-206ENST00000600118 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
MTHFRP42898 RPL37A-212ENST00000600880 425 ntTSL 2 BASIC13.27□□□□□ -0.29
MTHFRP42898 MEG8_2.1-201ENST00000610604 122 ntBASIC13.27□□□□□ -0.29
MTHFRP42898 AL353626.2-201ENST00000615372 130 ntBASIC13.27□□□□□ -0.29
MTHFRP42898 GMNN-207ENST00000620958 1039 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
MTHFRP42898 IGF2BP1-202ENST00000431824 1317 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
MTHFRP42898 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
MTHFRP42898 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC13.27□□□□□ -0.29
MTHFRP42898 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
MTHFRP42898 TACC1-209ENST00000520611 1550 ntTSL 2 BASIC13.27□□□□□ -0.29
MTHFRP42898 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
MTHFRP42898 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
MTHFRP42898 FAM230B-205ENST00000424410 1856 ntTSL 5 BASIC13.27□□□□□ -0.29
MTHFRP42898 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
MTHFRP42898 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC13.27□□□□□ -0.29
MTHFRP42898 TARS2-214ENST00000606933 2162 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
MTHFRP42898 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
MTHFRP42898 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
MTHFRP42898 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC13.26□□□□□ -0.29
MTHFRP42898 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
MTHFRP42898 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms