Protein–RNA interactions for Protein: Q9Y5H9

PCDHA2, Protocadherin alpha-2, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA2Q9Y5H9 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
PCDHA2Q9Y5H9 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PCDHA2Q9Y5H9 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC24.52■■□□□ 1.52
PCDHA2Q9Y5H9 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC24.52■■□□□ 1.52
PCDHA2Q9Y5H9 AC123595.1-201ENST00000440769 1046 ntBASIC24.52■■□□□ 1.52
PCDHA2Q9Y5H9 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC24.52■■□□□ 1.52
PCDHA2Q9Y5H9 AL031602.1-201ENST00000633169 911 ntBASIC24.52■■□□□ 1.52
PCDHA2Q9Y5H9 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
PCDHA2Q9Y5H9 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC24.52■■□□□ 1.52
PCDHA2Q9Y5H9 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC24.52■■□□□ 1.52
PCDHA2Q9Y5H9 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PCDHA2Q9Y5H9 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
PCDHA2Q9Y5H9 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
PCDHA2Q9Y5H9 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
PCDHA2Q9Y5H9 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC24.51■■□□□ 1.51
PCDHA2Q9Y5H9 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC24.51■■□□□ 1.51
PCDHA2Q9Y5H9 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC24.51■■□□□ 1.51
PCDHA2Q9Y5H9 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PCDHA2Q9Y5H9 RAB43-208ENST00000615093 783 ntTSL 5 BASIC24.51■■□□□ 1.51
PCDHA2Q9Y5H9 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC24.51■■□□□ 1.51
PCDHA2Q9Y5H9 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PCDHA2Q9Y5H9 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHA2Q9Y5H9 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
PCDHA2Q9Y5H9 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHA2Q9Y5H9 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHA2Q9Y5H9 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHA2Q9Y5H9 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
PCDHA2Q9Y5H9 GLI3-203ENST00000437480 451 ntTSL 2 BASIC24.5■■□□□ 1.51
PCDHA2Q9Y5H9 MIR6084-201ENST00000622012 110 ntBASIC24.5■■□□□ 1.51
PCDHA2Q9Y5H9 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHA2Q9Y5H9 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHA2Q9Y5H9 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHA2Q9Y5H9 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHA2Q9Y5H9 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
PCDHA2Q9Y5H9 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
PCDHA2Q9Y5H9 HACD1-201ENST00000326961 773 ntTSL 2 BASIC24.49■■□□□ 1.51
PCDHA2Q9Y5H9 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC24.49■■□□□ 1.51
PCDHA2Q9Y5H9 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC24.49■■□□□ 1.51
PCDHA2Q9Y5H9 LHPP-203ENST00000392757 840 ntTSL 3 BASIC24.49■■□□□ 1.51
PCDHA2Q9Y5H9 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC24.49■■□□□ 1.51
PCDHA2Q9Y5H9 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC24.49■■□□□ 1.51
PCDHA2Q9Y5H9 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
PCDHA2Q9Y5H9 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
PCDHA2Q9Y5H9 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC24.49■■□□□ 1.51
PCDHA2Q9Y5H9 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC24.49■■□□□ 1.51
PCDHA2Q9Y5H9 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC24.49■■□□□ 1.51
PCDHA2Q9Y5H9 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC24.49■■□□□ 1.51
PCDHA2Q9Y5H9 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC24.49■■□□□ 1.51
PCDHA2Q9Y5H9 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PCDHA2Q9Y5H9 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PCDHA2Q9Y5H9 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
PCDHA2Q9Y5H9 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
PCDHA2Q9Y5H9 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PCDHA2Q9Y5H9 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
PCDHA2Q9Y5H9 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC24.48■■□□□ 1.51
PCDHA2Q9Y5H9 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
PCDHA2Q9Y5H9 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC24.48■■□□□ 1.51
PCDHA2Q9Y5H9 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHA2Q9Y5H9 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
PCDHA2Q9Y5H9 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHA2Q9Y5H9 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC24.47■■□□□ 1.51
PCDHA2Q9Y5H9 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHA2Q9Y5H9 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHA2Q9Y5H9 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC24.47■■□□□ 1.51
PCDHA2Q9Y5H9 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.47■■□□□ 1.51
PCDHA2Q9Y5H9 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHA2Q9Y5H9 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHA2Q9Y5H9 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHA2Q9Y5H9 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
PCDHA2Q9Y5H9 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHA2Q9Y5H9 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHA2Q9Y5H9 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC24.46■■□□□ 1.51
PCDHA2Q9Y5H9 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
PCDHA2Q9Y5H9 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC24.46■■□□□ 1.51
PCDHA2Q9Y5H9 DUX4L2-201ENST00000561772 1275 ntBASIC24.46■■□□□ 1.51
PCDHA2Q9Y5H9 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC24.46■■□□□ 1.51
PCDHA2Q9Y5H9 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC24.46■■□□□ 1.51
PCDHA2Q9Y5H9 DUX4L6-201ENST00000626483 1275 ntBASIC24.46■■□□□ 1.51
PCDHA2Q9Y5H9 DUX4L1-201ENST00000627662 1275 ntBASIC24.46■■□□□ 1.51
PCDHA2Q9Y5H9 DUX4L8-201ENST00000629013 1275 ntBASIC24.46■■□□□ 1.51
PCDHA2Q9Y5H9 DUX4L3-201ENST00000630187 1275 ntBASIC24.46■■□□□ 1.51
PCDHA2Q9Y5H9 DUX4L7-201ENST00000630678 1275 ntBASIC24.46■■□□□ 1.51
PCDHA2Q9Y5H9 DUX4L5-201ENST00000630834 1275 ntBASIC24.46■■□□□ 1.51
PCDHA2Q9Y5H9 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
PCDHA2Q9Y5H9 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
PCDHA2Q9Y5H9 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
PCDHA2Q9Y5H9 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC24.45■■□□□ 1.51
PCDHA2Q9Y5H9 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
PCDHA2Q9Y5H9 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC24.45■■□□□ 1.5
PCDHA2Q9Y5H9 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
PCDHA2Q9Y5H9 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC24.45■■□□□ 1.5
PCDHA2Q9Y5H9 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC24.45■■□□□ 1.5
PCDHA2Q9Y5H9 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PCDHA2Q9Y5H9 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PCDHA2Q9Y5H9 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
PCDHA2Q9Y5H9 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
PCDHA2Q9Y5H9 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
PCDHA2Q9Y5H9 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC24.45■■□□□ 1.5
PCDHA2Q9Y5H9 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
PCDHA2Q9Y5H9 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms