Protein–RNA interactions for Protein: Q9Y3B2

EXOSC1, Exosome complex component CSL4, humanhuman

Known RBP Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1Q9Y3B2 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
EXOSC1Q9Y3B2 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
EXOSC1Q9Y3B2 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
EXOSC1Q9Y3B2 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
EXOSC1Q9Y3B2 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
EXOSC1Q9Y3B2 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
EXOSC1Q9Y3B2 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
EXOSC1Q9Y3B2 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
EXOSC1Q9Y3B2 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
EXOSC1Q9Y3B2 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
EXOSC1Q9Y3B2 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.5■□□□□ 0.71
EXOSC1Q9Y3B2 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.5■□□□□ 0.71
EXOSC1Q9Y3B2 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
EXOSC1Q9Y3B2 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
EXOSC1Q9Y3B2 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
EXOSC1Q9Y3B2 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
EXOSC1Q9Y3B2 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.5■□□□□ 0.71
EXOSC1Q9Y3B2 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
EXOSC1Q9Y3B2 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
EXOSC1Q9Y3B2 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.49■□□□□ 0.71
EXOSC1Q9Y3B2 KRT18P60-201ENST00000312876 1297 ntBASIC19.49■□□□□ 0.71
EXOSC1Q9Y3B2 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
EXOSC1Q9Y3B2 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.49■□□□□ 0.71
EXOSC1Q9Y3B2 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
EXOSC1Q9Y3B2 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
EXOSC1Q9Y3B2 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.49■□□□□ 0.71
EXOSC1Q9Y3B2 MBP-237ENST00000579129 1052 ntTSL 5 BASIC19.49■□□□□ 0.71
EXOSC1Q9Y3B2 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
EXOSC1Q9Y3B2 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
EXOSC1Q9Y3B2 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
EXOSC1Q9Y3B2 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
EXOSC1Q9Y3B2 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.48■□□□□ 0.71
EXOSC1Q9Y3B2 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
EXOSC1Q9Y3B2 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
EXOSC1Q9Y3B2 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
EXOSC1Q9Y3B2 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.48■□□□□ 0.71
EXOSC1Q9Y3B2 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
EXOSC1Q9Y3B2 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.48■□□□□ 0.71
EXOSC1Q9Y3B2 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.48■□□□□ 0.71
EXOSC1Q9Y3B2 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
EXOSC1Q9Y3B2 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
EXOSC1Q9Y3B2 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
EXOSC1Q9Y3B2 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
EXOSC1Q9Y3B2 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
EXOSC1Q9Y3B2 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
EXOSC1Q9Y3B2 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
EXOSC1Q9Y3B2 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
EXOSC1Q9Y3B2 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.47■□□□□ 0.71
EXOSC1Q9Y3B2 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
EXOSC1Q9Y3B2 CA15P2-201ENST00000611168 834 ntBASIC19.47■□□□□ 0.71
EXOSC1Q9Y3B2 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
EXOSC1Q9Y3B2 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
EXOSC1Q9Y3B2 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
EXOSC1Q9Y3B2 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.47■□□□□ 0.71
EXOSC1Q9Y3B2 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
EXOSC1Q9Y3B2 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
EXOSC1Q9Y3B2 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
EXOSC1Q9Y3B2 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.46■□□□□ 0.71
EXOSC1Q9Y3B2 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
EXOSC1Q9Y3B2 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
EXOSC1Q9Y3B2 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.46■□□□□ 0.71
EXOSC1Q9Y3B2 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.46■□□□□ 0.71
EXOSC1Q9Y3B2 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
EXOSC1Q9Y3B2 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
EXOSC1Q9Y3B2 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.46■□□□□ 0.71
EXOSC1Q9Y3B2 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
EXOSC1Q9Y3B2 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
EXOSC1Q9Y3B2 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
EXOSC1Q9Y3B2 SNX5-217ENST00000606557 1087 ntBASIC19.46■□□□□ 0.71
EXOSC1Q9Y3B2 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
EXOSC1Q9Y3B2 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.46■□□□□ 0.71
EXOSC1Q9Y3B2 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
EXOSC1Q9Y3B2 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
EXOSC1Q9Y3B2 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
EXOSC1Q9Y3B2 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
EXOSC1Q9Y3B2 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
EXOSC1Q9Y3B2 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.46■□□□□ 0.71
EXOSC1Q9Y3B2 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
EXOSC1Q9Y3B2 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
EXOSC1Q9Y3B2 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
EXOSC1Q9Y3B2 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
EXOSC1Q9Y3B2 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
EXOSC1Q9Y3B2 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
EXOSC1Q9Y3B2 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
EXOSC1Q9Y3B2 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
EXOSC1Q9Y3B2 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
EXOSC1Q9Y3B2 RARRES2P2-201ENST00000394842 485 ntBASIC19.45■□□□□ 0.7
EXOSC1Q9Y3B2 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.45■□□□□ 0.7
EXOSC1Q9Y3B2 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
EXOSC1Q9Y3B2 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.45■□□□□ 0.7
EXOSC1Q9Y3B2 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
EXOSC1Q9Y3B2 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
EXOSC1Q9Y3B2 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
EXOSC1Q9Y3B2 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
EXOSC1Q9Y3B2 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.45■□□□□ 0.7
EXOSC1Q9Y3B2 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
EXOSC1Q9Y3B2 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
EXOSC1Q9Y3B2 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.44■□□□□ 0.7
EXOSC1Q9Y3B2 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
EXOSC1Q9Y3B2 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms