Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COMMD3Q9UBI1 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COMMD3Q9UBI1 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
COMMD3Q9UBI1 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COMMD3Q9UBI1 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COMMD3Q9UBI1 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
COMMD3Q9UBI1 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COMMD3Q9UBI1 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
COMMD3Q9UBI1 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
COMMD3Q9UBI1 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
COMMD3Q9UBI1 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.15■□□□□ 0.66
COMMD3Q9UBI1 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COMMD3Q9UBI1 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
COMMD3Q9UBI1 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COMMD3Q9UBI1 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
COMMD3Q9UBI1 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COMMD3Q9UBI1 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
COMMD3Q9UBI1 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
COMMD3Q9UBI1 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
COMMD3Q9UBI1 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COMMD3Q9UBI1 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.15■□□□□ 0.66
COMMD3Q9UBI1 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC19.15■□□□□ 0.66
COMMD3Q9UBI1 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.15■□□□□ 0.66
COMMD3Q9UBI1 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.15■□□□□ 0.66
COMMD3Q9UBI1 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.15■□□□□ 0.66
COMMD3Q9UBI1 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
COMMD3Q9UBI1 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COMMD3Q9UBI1 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
COMMD3Q9UBI1 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COMMD3Q9UBI1 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.14■□□□□ 0.66
COMMD3Q9UBI1 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.14■□□□□ 0.65
COMMD3Q9UBI1 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.14■□□□□ 0.65
COMMD3Q9UBI1 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
COMMD3Q9UBI1 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.14■□□□□ 0.65
COMMD3Q9UBI1 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
COMMD3Q9UBI1 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
COMMD3Q9UBI1 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
COMMD3Q9UBI1 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COMMD3Q9UBI1 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
COMMD3Q9UBI1 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
COMMD3Q9UBI1 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC19.14■□□□□ 0.65
COMMD3Q9UBI1 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.14■□□□□ 0.65
COMMD3Q9UBI1 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.14■□□□□ 0.65
COMMD3Q9UBI1 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COMMD3Q9UBI1 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
COMMD3Q9UBI1 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COMMD3Q9UBI1 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
COMMD3Q9UBI1 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
COMMD3Q9UBI1 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
COMMD3Q9UBI1 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COMMD3Q9UBI1 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
COMMD3Q9UBI1 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COMMD3Q9UBI1 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
COMMD3Q9UBI1 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.13■□□□□ 0.65
COMMD3Q9UBI1 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COMMD3Q9UBI1 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COMMD3Q9UBI1 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COMMD3Q9UBI1 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.13■□□□□ 0.65
COMMD3Q9UBI1 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COMMD3Q9UBI1 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COMMD3Q9UBI1 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COMMD3Q9UBI1 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COMMD3Q9UBI1 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COMMD3Q9UBI1 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
COMMD3Q9UBI1 LINC01521-201ENST00000504184 1943 ntBASIC19.12■□□□□ 0.65
COMMD3Q9UBI1 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COMMD3Q9UBI1 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.12■□□□□ 0.65
COMMD3Q9UBI1 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
COMMD3Q9UBI1 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
COMMD3Q9UBI1 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COMMD3Q9UBI1 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.12■□□□□ 0.65
COMMD3Q9UBI1 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.12■□□□□ 0.65
COMMD3Q9UBI1 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.12■□□□□ 0.65
COMMD3Q9UBI1 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COMMD3Q9UBI1 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COMMD3Q9UBI1 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COMMD3Q9UBI1 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
COMMD3Q9UBI1 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COMMD3Q9UBI1 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
COMMD3Q9UBI1 AF106564.1-201ENST00000607058 2553 ntBASIC19.11■□□□□ 0.65
COMMD3Q9UBI1 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
COMMD3Q9UBI1 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.11■□□□□ 0.65
COMMD3Q9UBI1 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
COMMD3Q9UBI1 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COMMD3Q9UBI1 RNF165-205ENST00000588679 2904 ntBASIC19.11■□□□□ 0.65
COMMD3Q9UBI1 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COMMD3Q9UBI1 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COMMD3Q9UBI1 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COMMD3Q9UBI1 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
COMMD3Q9UBI1 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COMMD3Q9UBI1 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COMMD3Q9UBI1 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
COMMD3Q9UBI1 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
COMMD3Q9UBI1 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
COMMD3Q9UBI1 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
COMMD3Q9UBI1 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.1■□□□□ 0.65
COMMD3Q9UBI1 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC19.1■□□□□ 0.65
COMMD3Q9UBI1 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.1■□□□□ 0.65
COMMD3Q9UBI1 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
COMMD3Q9UBI1 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms