Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CPSF2Q9P2I0 AC137767.1-201ENST00000602918 1920 ntBASIC21.86■■□□□ 1.09
CPSF2Q9P2I0 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.86■■□□□ 1.09
CPSF2Q9P2I0 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CPSF2Q9P2I0 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CPSF2Q9P2I0 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CPSF2Q9P2I0 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.86■■□□□ 1.09
CPSF2Q9P2I0 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
CPSF2Q9P2I0 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
CPSF2Q9P2I0 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CPSF2Q9P2I0 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CPSF2Q9P2I0 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
CPSF2Q9P2I0 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
CPSF2Q9P2I0 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
CPSF2Q9P2I0 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.86■■□□□ 1.09
CPSF2Q9P2I0 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.86■■□□□ 1.09
CPSF2Q9P2I0 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CPSF2Q9P2I0 AC007375.3-201ENST00000600936 2314 ntBASIC21.86■■□□□ 1.09
CPSF2Q9P2I0 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CPSF2Q9P2I0 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CPSF2Q9P2I0 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CPSF2Q9P2I0 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CPSF2Q9P2I0 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
CPSF2Q9P2I0 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
CPSF2Q9P2I0 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CPSF2Q9P2I0 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
CPSF2Q9P2I0 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CPSF2Q9P2I0 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.85■■□□□ 1.09
CPSF2Q9P2I0 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CPSF2Q9P2I0 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.85■■□□□ 1.09
CPSF2Q9P2I0 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CPSF2Q9P2I0 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
CPSF2Q9P2I0 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.85■■□□□ 1.09
CPSF2Q9P2I0 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
CPSF2Q9P2I0 MIR6722-201ENST00000617286 78 ntBASIC21.85■■□□□ 1.09
CPSF2Q9P2I0 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.85■■□□□ 1.09
CPSF2Q9P2I0 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CPSF2Q9P2I0 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CPSF2Q9P2I0 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CPSF2Q9P2I0 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CPSF2Q9P2I0 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
CPSF2Q9P2I0 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CPSF2Q9P2I0 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CPSF2Q9P2I0 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CPSF2Q9P2I0 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.84■■□□□ 1.09
CPSF2Q9P2I0 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.84■■□□□ 1.09
CPSF2Q9P2I0 AC092053.2-201ENST00000640557 1818 ntBASIC21.84■■□□□ 1.09
CPSF2Q9P2I0 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CPSF2Q9P2I0 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CPSF2Q9P2I0 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
CPSF2Q9P2I0 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CPSF2Q9P2I0 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
CPSF2Q9P2I0 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.83■■□□□ 1.09
CPSF2Q9P2I0 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
CPSF2Q9P2I0 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.83■■□□□ 1.09
CPSF2Q9P2I0 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.83■■□□□ 1.09
CPSF2Q9P2I0 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CPSF2Q9P2I0 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
CPSF2Q9P2I0 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
CPSF2Q9P2I0 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
CPSF2Q9P2I0 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CPSF2Q9P2I0 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
CPSF2Q9P2I0 LINC01529-204ENST00000636474 1715 ntBASIC21.83■■□□□ 1.08
CPSF2Q9P2I0 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CPSF2Q9P2I0 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
CPSF2Q9P2I0 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CPSF2Q9P2I0 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.82■■□□□ 1.08
CPSF2Q9P2I0 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CPSF2Q9P2I0 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CPSF2Q9P2I0 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CPSF2Q9P2I0 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
CPSF2Q9P2I0 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.81■■□□□ 1.08
CPSF2Q9P2I0 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CPSF2Q9P2I0 C11orf96-202ENST00000528572 1834 ntBASIC21.81■■□□□ 1.08
CPSF2Q9P2I0 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CPSF2Q9P2I0 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CPSF2Q9P2I0 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CPSF2Q9P2I0 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CPSF2Q9P2I0 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.81■■□□□ 1.08
CPSF2Q9P2I0 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.81■■□□□ 1.08
CPSF2Q9P2I0 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CPSF2Q9P2I0 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CPSF2Q9P2I0 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CPSF2Q9P2I0 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
CPSF2Q9P2I0 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CPSF2Q9P2I0 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.8■■□□□ 1.08
CPSF2Q9P2I0 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CPSF2Q9P2I0 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CPSF2Q9P2I0 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CPSF2Q9P2I0 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CPSF2Q9P2I0 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.8■■□□□ 1.08
CPSF2Q9P2I0 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CPSF2Q9P2I0 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC21.8■■□□□ 1.08
CPSF2Q9P2I0 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CPSF2Q9P2I0 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CPSF2Q9P2I0 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CPSF2Q9P2I0 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CPSF2Q9P2I0 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CPSF2Q9P2I0 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.8■■□□□ 1.08
CPSF2Q9P2I0 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms