Protein–RNA interactions for Protein: Q9NY12

GAR1, H/ACA ribonucleoprotein complex subunit 1, humanhuman

Known RBP Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAR1Q9NY12 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GAR1Q9NY12 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
GAR1Q9NY12 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC17.6■□□□□ 0.41
GAR1Q9NY12 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC17.6■□□□□ 0.41
GAR1Q9NY12 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC17.6■□□□□ 0.41
GAR1Q9NY12 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
GAR1Q9NY12 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GAR1Q9NY12 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC17.6■□□□□ 0.41
GAR1Q9NY12 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
GAR1Q9NY12 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GAR1Q9NY12 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC17.6■□□□□ 0.41
GAR1Q9NY12 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC17.6■□□□□ 0.41
GAR1Q9NY12 AC092068.2-201ENST00000590491 1708 ntBASIC17.6■□□□□ 0.41
GAR1Q9NY12 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GAR1Q9NY12 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
GAR1Q9NY12 TERT-206ENST00000508104 2486 ntTSL 5 BASIC17.6■□□□□ 0.41
GAR1Q9NY12 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GAR1Q9NY12 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
GAR1Q9NY12 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GAR1Q9NY12 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GAR1Q9NY12 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.59■□□□□ 0.41
GAR1Q9NY12 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GAR1Q9NY12 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
GAR1Q9NY12 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GAR1Q9NY12 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC17.59■□□□□ 0.41
GAR1Q9NY12 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GAR1Q9NY12 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
GAR1Q9NY12 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC17.59■□□□□ 0.41
GAR1Q9NY12 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC17.59■□□□□ 0.41
GAR1Q9NY12 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.59■□□□□ 0.41
GAR1Q9NY12 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
GAR1Q9NY12 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GAR1Q9NY12 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GAR1Q9NY12 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC17.59■□□□□ 0.41
GAR1Q9NY12 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
GAR1Q9NY12 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
GAR1Q9NY12 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC17.58■□□□□ 0.41
GAR1Q9NY12 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
GAR1Q9NY12 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
GAR1Q9NY12 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
GAR1Q9NY12 REST-206ENST00000612429 1376 ntTSL 5 BASIC17.58■□□□□ 0.4
GAR1Q9NY12 REST-207ENST00000616975 1370 ntTSL 5 BASIC17.58■□□□□ 0.4
GAR1Q9NY12 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
GAR1Q9NY12 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
GAR1Q9NY12 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
GAR1Q9NY12 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC17.58■□□□□ 0.4
GAR1Q9NY12 KRT125P-201ENST00000546827 989 ntBASIC17.58■□□□□ 0.4
GAR1Q9NY12 Z92544.1-202ENST00000571933 1220 ntBASIC17.58■□□□□ 0.4
GAR1Q9NY12 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC17.58■□□□□ 0.4
GAR1Q9NY12 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC17.58■□□□□ 0.4
GAR1Q9NY12 SNX5-217ENST00000606557 1087 ntBASIC17.58■□□□□ 0.4
GAR1Q9NY12 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
GAR1Q9NY12 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
GAR1Q9NY12 ANOS2P-203ENST00000472227 1816 ntBASIC17.58■□□□□ 0.4
GAR1Q9NY12 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
GAR1Q9NY12 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
GAR1Q9NY12 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
GAR1Q9NY12 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
GAR1Q9NY12 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
GAR1Q9NY12 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
GAR1Q9NY12 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC17.57■□□□□ 0.4
GAR1Q9NY12 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
GAR1Q9NY12 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
GAR1Q9NY12 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.57■□□□□ 0.4
GAR1Q9NY12 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GAR1Q9NY12 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
GAR1Q9NY12 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
GAR1Q9NY12 MIR6722-201ENST00000617286 78 ntBASIC17.57■□□□□ 0.4
GAR1Q9NY12 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GAR1Q9NY12 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GAR1Q9NY12 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
GAR1Q9NY12 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
GAR1Q9NY12 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GAR1Q9NY12 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GAR1Q9NY12 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
GAR1Q9NY12 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GAR1Q9NY12 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC17.56■□□□□ 0.4
GAR1Q9NY12 AC021242.3-201ENST00000607598 1377 ntBASIC17.56■□□□□ 0.4
GAR1Q9NY12 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GAR1Q9NY12 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GAR1Q9NY12 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GAR1Q9NY12 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
GAR1Q9NY12 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
GAR1Q9NY12 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC17.56■□□□□ 0.4
GAR1Q9NY12 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC17.56■□□□□ 0.4
GAR1Q9NY12 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC17.56■□□□□ 0.4
GAR1Q9NY12 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.56■□□□□ 0.4
GAR1Q9NY12 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GAR1Q9NY12 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
GAR1Q9NY12 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GAR1Q9NY12 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.56■□□□□ 0.4
GAR1Q9NY12 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GAR1Q9NY12 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GAR1Q9NY12 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GAR1Q9NY12 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.55■□□□□ 0.4
GAR1Q9NY12 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GAR1Q9NY12 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GAR1Q9NY12 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GAR1Q9NY12 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
GAR1Q9NY12 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms