Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PARPBPQ9NWS1 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
PARPBPQ9NWS1 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.48■□□□□ 0.71
PARPBPQ9NWS1 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PARPBPQ9NWS1 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PARPBPQ9NWS1 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PARPBPQ9NWS1 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.47■□□□□ 0.71
PARPBPQ9NWS1 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PARPBPQ9NWS1 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PARPBPQ9NWS1 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
PARPBPQ9NWS1 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PARPBPQ9NWS1 AC099791.1-201ENST00000416440 715 ntBASIC19.47■□□□□ 0.71
PARPBPQ9NWS1 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PARPBPQ9NWS1 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.47■□□□□ 0.71
PARPBPQ9NWS1 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
PARPBPQ9NWS1 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PARPBPQ9NWS1 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PARPBPQ9NWS1 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
PARPBPQ9NWS1 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PARPBPQ9NWS1 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
PARPBPQ9NWS1 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.47■□□□□ 0.71
PARPBPQ9NWS1 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PARPBPQ9NWS1 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PARPBPQ9NWS1 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PARPBPQ9NWS1 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PARPBPQ9NWS1 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PARPBPQ9NWS1 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.46■□□□□ 0.71
PARPBPQ9NWS1 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.46■□□□□ 0.71
PARPBPQ9NWS1 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PARPBPQ9NWS1 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PARPBPQ9NWS1 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
PARPBPQ9NWS1 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PARPBPQ9NWS1 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
PARPBPQ9NWS1 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PARPBPQ9NWS1 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PARPBPQ9NWS1 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PARPBPQ9NWS1 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
PARPBPQ9NWS1 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
PARPBPQ9NWS1 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PARPBPQ9NWS1 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
PARPBPQ9NWS1 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
PARPBPQ9NWS1 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.45■□□□□ 0.7
PARPBPQ9NWS1 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.45■□□□□ 0.7
PARPBPQ9NWS1 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PARPBPQ9NWS1 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PARPBPQ9NWS1 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PARPBPQ9NWS1 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
PARPBPQ9NWS1 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.45■□□□□ 0.7
PARPBPQ9NWS1 AC010525.1-201ENST00000585559 441 ntBASIC19.45■□□□□ 0.7
PARPBPQ9NWS1 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PARPBPQ9NWS1 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PARPBPQ9NWS1 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.45■□□□□ 0.7
PARPBPQ9NWS1 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PARPBPQ9NWS1 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.44■□□□□ 0.7
PARPBPQ9NWS1 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.44■□□□□ 0.7
PARPBPQ9NWS1 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
PARPBPQ9NWS1 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PARPBPQ9NWS1 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
PARPBPQ9NWS1 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
PARPBPQ9NWS1 CA15P2-201ENST00000611168 834 ntBASIC19.44■□□□□ 0.7
PARPBPQ9NWS1 AL031602.1-201ENST00000633169 911 ntBASIC19.44■□□□□ 0.7
PARPBPQ9NWS1 AC079834.2-201ENST00000609776 1949 ntBASIC19.44■□□□□ 0.7
PARPBPQ9NWS1 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.44■□□□□ 0.7
PARPBPQ9NWS1 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PARPBPQ9NWS1 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.44■□□□□ 0.7
PARPBPQ9NWS1 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.44■□□□□ 0.7
PARPBPQ9NWS1 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PARPBPQ9NWS1 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PARPBPQ9NWS1 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
PARPBPQ9NWS1 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PARPBPQ9NWS1 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.43■□□□□ 0.7
PARPBPQ9NWS1 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PARPBPQ9NWS1 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.43■□□□□ 0.7
PARPBPQ9NWS1 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.43■□□□□ 0.7
PARPBPQ9NWS1 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PARPBPQ9NWS1 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PARPBPQ9NWS1 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PARPBPQ9NWS1 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PARPBPQ9NWS1 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
PARPBPQ9NWS1 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.43■□□□□ 0.7
PARPBPQ9NWS1 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PARPBPQ9NWS1 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
PARPBPQ9NWS1 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.42■□□□□ 0.7
PARPBPQ9NWS1 AC068473.5-201ENST00000616428 2072 ntBASIC19.42■□□□□ 0.7
PARPBPQ9NWS1 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PARPBPQ9NWS1 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PARPBPQ9NWS1 LINC01960-201ENST00000563759 1884 ntBASIC19.42■□□□□ 0.7
PARPBPQ9NWS1 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
PARPBPQ9NWS1 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PARPBPQ9NWS1 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PARPBPQ9NWS1 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PARPBPQ9NWS1 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PARPBPQ9NWS1 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.42■□□□□ 0.7
PARPBPQ9NWS1 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.42■□□□□ 0.7
PARPBPQ9NWS1 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.42■□□□□ 0.7
PARPBPQ9NWS1 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
PARPBPQ9NWS1 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PARPBPQ9NWS1 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PARPBPQ9NWS1 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PARPBPQ9NWS1 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms