Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTPS2Q9NRF8 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTPS2Q9NRF8 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.23■□□□□ 0.83
CTPS2Q9NRF8 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.23■□□□□ 0.83
CTPS2Q9NRF8 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTPS2Q9NRF8 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.23■□□□□ 0.83
CTPS2Q9NRF8 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTPS2Q9NRF8 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTPS2Q9NRF8 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.23■□□□□ 0.83
CTPS2Q9NRF8 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.23■□□□□ 0.83
CTPS2Q9NRF8 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTPS2Q9NRF8 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTPS2Q9NRF8 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.23■□□□□ 0.83
CTPS2Q9NRF8 AC004687.1-201ENST00000579003 1625 ntBASIC20.23■□□□□ 0.83
CTPS2Q9NRF8 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTPS2Q9NRF8 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.23■□□□□ 0.83
CTPS2Q9NRF8 AC007375.3-201ENST00000600936 2314 ntBASIC20.22■□□□□ 0.83
CTPS2Q9NRF8 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTPS2Q9NRF8 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.22■□□□□ 0.83
CTPS2Q9NRF8 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.22■□□□□ 0.83
CTPS2Q9NRF8 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.22■□□□□ 0.83
CTPS2Q9NRF8 DUX4L4-201ENST00000566884 1269 ntBASIC20.22■□□□□ 0.83
CTPS2Q9NRF8 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.22■□□□□ 0.83
CTPS2Q9NRF8 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.22■□□□□ 0.83
CTPS2Q9NRF8 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.22■□□□□ 0.83
CTPS2Q9NRF8 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTPS2Q9NRF8 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.22■□□□□ 0.83
CTPS2Q9NRF8 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
CTPS2Q9NRF8 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CTPS2Q9NRF8 LINC01960-201ENST00000563759 1884 ntBASIC20.22■□□□□ 0.83
CTPS2Q9NRF8 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CTPS2Q9NRF8 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTPS2Q9NRF8 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
CTPS2Q9NRF8 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CTPS2Q9NRF8 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTPS2Q9NRF8 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.21■□□□□ 0.83
CTPS2Q9NRF8 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CTPS2Q9NRF8 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTPS2Q9NRF8 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTPS2Q9NRF8 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTPS2Q9NRF8 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.21■□□□□ 0.83
CTPS2Q9NRF8 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.21■□□□□ 0.83
CTPS2Q9NRF8 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.21■□□□□ 0.83
CTPS2Q9NRF8 AL512631.2-201ENST00000604634 923 ntBASIC20.21■□□□□ 0.83
CTPS2Q9NRF8 AC009086.3-201ENST00000623486 1008 ntBASIC20.21■□□□□ 0.83
CTPS2Q9NRF8 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTPS2Q9NRF8 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CTPS2Q9NRF8 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTPS2Q9NRF8 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CTPS2Q9NRF8 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.21■□□□□ 0.83
CTPS2Q9NRF8 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTPS2Q9NRF8 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTPS2Q9NRF8 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.21■□□□□ 0.83
CTPS2Q9NRF8 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
CTPS2Q9NRF8 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTPS2Q9NRF8 C11orf96-202ENST00000528572 1834 ntBASIC20.2■□□□□ 0.82
CTPS2Q9NRF8 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.2■□□□□ 0.82
CTPS2Q9NRF8 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CTPS2Q9NRF8 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTPS2Q9NRF8 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.2■□□□□ 0.82
CTPS2Q9NRF8 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTPS2Q9NRF8 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CTPS2Q9NRF8 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CTPS2Q9NRF8 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
CTPS2Q9NRF8 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTPS2Q9NRF8 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.2■□□□□ 0.82
CTPS2Q9NRF8 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.2■□□□□ 0.82
CTPS2Q9NRF8 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTPS2Q9NRF8 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTPS2Q9NRF8 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTPS2Q9NRF8 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CTPS2Q9NRF8 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CTPS2Q9NRF8 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CTPS2Q9NRF8 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTPS2Q9NRF8 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTPS2Q9NRF8 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CTPS2Q9NRF8 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CTPS2Q9NRF8 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CTPS2Q9NRF8 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CTPS2Q9NRF8 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTPS2Q9NRF8 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTPS2Q9NRF8 FBXW4P1-201ENST00000426721 2239 ntBASIC20.19■□□□□ 0.82
CTPS2Q9NRF8 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CTPS2Q9NRF8 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CTPS2Q9NRF8 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTPS2Q9NRF8 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTPS2Q9NRF8 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CTPS2Q9NRF8 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTPS2Q9NRF8 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.18■□□□□ 0.82
CTPS2Q9NRF8 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTPS2Q9NRF8 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.18■□□□□ 0.82
CTPS2Q9NRF8 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.18■□□□□ 0.82
CTPS2Q9NRF8 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.18■□□□□ 0.82
CTPS2Q9NRF8 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.18■□□□□ 0.82
CTPS2Q9NRF8 AC131212.1-201ENST00000613771 668 ntBASIC20.18■□□□□ 0.82
CTPS2Q9NRF8 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CTPS2Q9NRF8 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.18■□□□□ 0.82
CTPS2Q9NRF8 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.18■□□□□ 0.82
CTPS2Q9NRF8 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CTPS2Q9NRF8 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms