Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC52A3Q9NQ40 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SLC52A3Q9NQ40 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.76■□□□□ 0.91
SLC52A3Q9NQ40 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.76■□□□□ 0.91
SLC52A3Q9NQ40 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.76■□□□□ 0.91
SLC52A3Q9NQ40 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.76■□□□□ 0.91
SLC52A3Q9NQ40 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC52A3Q9NQ40 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC52A3Q9NQ40 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
SLC52A3Q9NQ40 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.76■□□□□ 0.91
SLC52A3Q9NQ40 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC52A3Q9NQ40 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SLC52A3Q9NQ40 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.75■□□□□ 0.91
SLC52A3Q9NQ40 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC52A3Q9NQ40 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC52A3Q9NQ40 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.75■□□□□ 0.91
SLC52A3Q9NQ40 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.75■□□□□ 0.91
SLC52A3Q9NQ40 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.75■□□□□ 0.91
SLC52A3Q9NQ40 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
SLC52A3Q9NQ40 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
SLC52A3Q9NQ40 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SLC52A3Q9NQ40 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.74■□□□□ 0.91
SLC52A3Q9NQ40 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC52A3Q9NQ40 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC52A3Q9NQ40 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC52A3Q9NQ40 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
SLC52A3Q9NQ40 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SLC52A3Q9NQ40 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC52A3Q9NQ40 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SLC52A3Q9NQ40 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
SLC52A3Q9NQ40 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.73■□□□□ 0.91
SLC52A3Q9NQ40 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.73■□□□□ 0.91
SLC52A3Q9NQ40 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC52A3Q9NQ40 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC52A3Q9NQ40 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.73■□□□□ 0.91
SLC52A3Q9NQ40 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.73■□□□□ 0.91
SLC52A3Q9NQ40 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC52A3Q9NQ40 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
SLC52A3Q9NQ40 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SLC52A3Q9NQ40 C17orf82-201ENST00000623772 1530 ntBASIC20.73■□□□□ 0.91
SLC52A3Q9NQ40 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC52A3Q9NQ40 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SLC52A3Q9NQ40 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC52A3Q9NQ40 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC52A3Q9NQ40 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC52A3Q9NQ40 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
SLC52A3Q9NQ40 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC52A3Q9NQ40 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.72■□□□□ 0.91
SLC52A3Q9NQ40 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
SLC52A3Q9NQ40 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SLC52A3Q9NQ40 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC52A3Q9NQ40 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC52A3Q9NQ40 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.72■□□□□ 0.91
SLC52A3Q9NQ40 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SLC52A3Q9NQ40 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
SLC52A3Q9NQ40 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
SLC52A3Q9NQ40 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.71■□□□□ 0.91
SLC52A3Q9NQ40 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC52A3Q9NQ40 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.71■□□□□ 0.91
SLC52A3Q9NQ40 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC52A3Q9NQ40 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC52A3Q9NQ40 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC52A3Q9NQ40 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.71■□□□□ 0.91
SLC52A3Q9NQ40 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
SLC52A3Q9NQ40 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.7■□□□□ 0.91
SLC52A3Q9NQ40 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.7■□□□□ 0.91
SLC52A3Q9NQ40 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.91
SLC52A3Q9NQ40 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SLC52A3Q9NQ40 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.7■□□□□ 0.9
SLC52A3Q9NQ40 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC52A3Q9NQ40 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
SLC52A3Q9NQ40 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.7■□□□□ 0.9
SLC52A3Q9NQ40 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.7■□□□□ 0.9
SLC52A3Q9NQ40 AC092028.1-203ENST00000608262 953 ntBASIC20.7■□□□□ 0.9
SLC52A3Q9NQ40 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SLC52A3Q9NQ40 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC52A3Q9NQ40 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC52A3Q9NQ40 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
SLC52A3Q9NQ40 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SLC52A3Q9NQ40 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC52A3Q9NQ40 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SLC52A3Q9NQ40 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC52A3Q9NQ40 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC52A3Q9NQ40 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SLC52A3Q9NQ40 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.69■□□□□ 0.9
SLC52A3Q9NQ40 AL499627.2-201ENST00000606283 725 ntBASIC20.69■□□□□ 0.9
SLC52A3Q9NQ40 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.69■□□□□ 0.9
SLC52A3Q9NQ40 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC52A3Q9NQ40 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SLC52A3Q9NQ40 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC52A3Q9NQ40 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC52A3Q9NQ40 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.68■□□□□ 0.9
SLC52A3Q9NQ40 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC52A3Q9NQ40 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC52A3Q9NQ40 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC52A3Q9NQ40 Z98882.1-201ENST00000622160 2253 ntBASIC20.68■□□□□ 0.9
SLC52A3Q9NQ40 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SLC52A3Q9NQ40 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.68■□□□□ 0.9
SLC52A3Q9NQ40 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.68■□□□□ 0.9
SLC52A3Q9NQ40 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms