Protein–RNA interactions for Protein: Q9NPL8

TIMMDC1, Complex I assembly factor TIMMDC1, mitochondrial, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMMDC1Q9NPL8 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.83■□□□□ 0.93
TIMMDC1Q9NPL8 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.83■□□□□ 0.93
TIMMDC1Q9NPL8 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TIMMDC1Q9NPL8 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.83■□□□□ 0.92
TIMMDC1Q9NPL8 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
TIMMDC1Q9NPL8 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.83■□□□□ 0.92
TIMMDC1Q9NPL8 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
TIMMDC1Q9NPL8 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
TIMMDC1Q9NPL8 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.83■□□□□ 0.92
TIMMDC1Q9NPL8 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.83■□□□□ 0.92
TIMMDC1Q9NPL8 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TIMMDC1Q9NPL8 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TIMMDC1Q9NPL8 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TIMMDC1Q9NPL8 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
TIMMDC1Q9NPL8 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.82■□□□□ 0.92
TIMMDC1Q9NPL8 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TIMMDC1Q9NPL8 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TIMMDC1Q9NPL8 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TIMMDC1Q9NPL8 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.82■□□□□ 0.92
TIMMDC1Q9NPL8 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
TIMMDC1Q9NPL8 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
TIMMDC1Q9NPL8 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
TIMMDC1Q9NPL8 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TIMMDC1Q9NPL8 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TIMMDC1Q9NPL8 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.81■□□□□ 0.92
TIMMDC1Q9NPL8 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TIMMDC1Q9NPL8 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
TIMMDC1Q9NPL8 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TIMMDC1Q9NPL8 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
TIMMDC1Q9NPL8 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TIMMDC1Q9NPL8 UNC93B3-201ENST00000308076 687 ntBASIC20.81■□□□□ 0.92
TIMMDC1Q9NPL8 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
TIMMDC1Q9NPL8 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TIMMDC1Q9NPL8 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TIMMDC1Q9NPL8 AC009102.2-201ENST00000606772 1639 ntBASIC20.81■□□□□ 0.92
TIMMDC1Q9NPL8 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TIMMDC1Q9NPL8 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
TIMMDC1Q9NPL8 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.8■□□□□ 0.92
TIMMDC1Q9NPL8 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
TIMMDC1Q9NPL8 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TIMMDC1Q9NPL8 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.8■□□□□ 0.92
TIMMDC1Q9NPL8 PBX2P1-201ENST00000493219 1291 ntBASIC20.8■□□□□ 0.92
TIMMDC1Q9NPL8 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TIMMDC1Q9NPL8 AC133561.4-201ENST00000566112 224 ntBASIC20.8■□□□□ 0.92
TIMMDC1Q9NPL8 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
TIMMDC1Q9NPL8 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TIMMDC1Q9NPL8 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
TIMMDC1Q9NPL8 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TIMMDC1Q9NPL8 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TIMMDC1Q9NPL8 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TIMMDC1Q9NPL8 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.8■□□□□ 0.92
TIMMDC1Q9NPL8 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TIMMDC1Q9NPL8 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.8■□□□□ 0.92
TIMMDC1Q9NPL8 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TIMMDC1Q9NPL8 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TIMMDC1Q9NPL8 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TIMMDC1Q9NPL8 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TIMMDC1Q9NPL8 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
TIMMDC1Q9NPL8 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TIMMDC1Q9NPL8 AL136162.1-201ENST00000607711 1078 ntBASIC20.79■□□□□ 0.92
TIMMDC1Q9NPL8 AC106739.1-201ENST00000617035 715 ntBASIC20.79■□□□□ 0.92
TIMMDC1Q9NPL8 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.79■□□□□ 0.92
TIMMDC1Q9NPL8 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TIMMDC1Q9NPL8 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.78■□□□□ 0.92
TIMMDC1Q9NPL8 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TIMMDC1Q9NPL8 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TIMMDC1Q9NPL8 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TIMMDC1Q9NPL8 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
TIMMDC1Q9NPL8 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
TIMMDC1Q9NPL8 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TIMMDC1Q9NPL8 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TIMMDC1Q9NPL8 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
TIMMDC1Q9NPL8 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TIMMDC1Q9NPL8 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.78■□□□□ 0.92
TIMMDC1Q9NPL8 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TIMMDC1Q9NPL8 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.78■□□□□ 0.92
TIMMDC1Q9NPL8 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TIMMDC1Q9NPL8 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TIMMDC1Q9NPL8 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TIMMDC1Q9NPL8 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
TIMMDC1Q9NPL8 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
TIMMDC1Q9NPL8 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TIMMDC1Q9NPL8 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
TIMMDC1Q9NPL8 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.92
TIMMDC1Q9NPL8 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TIMMDC1Q9NPL8 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TIMMDC1Q9NPL8 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.77■□□□□ 0.92
TIMMDC1Q9NPL8 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TIMMDC1Q9NPL8 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
TIMMDC1Q9NPL8 SYT6-210ENST00000641643 1587 ntBASIC20.76■□□□□ 0.91
TIMMDC1Q9NPL8 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
TIMMDC1Q9NPL8 AC242852.2-201ENST00000615738 1807 ntBASIC20.76■□□□□ 0.91
TIMMDC1Q9NPL8 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TIMMDC1Q9NPL8 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
TIMMDC1Q9NPL8 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TIMMDC1Q9NPL8 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TIMMDC1Q9NPL8 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.76■□□□□ 0.91
TIMMDC1Q9NPL8 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TIMMDC1Q9NPL8 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.76■□□□□ 0.91
TIMMDC1Q9NPL8 AC005837.3-201ENST00000612163 286 ntBASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms