Protein–RNA interactions for Protein: Q9HCJ2

LRRC4C, Leucine-rich repeat-containing protein 4C, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC4CQ9HCJ2 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
LRRC4CQ9HCJ2 LINC01529-204ENST00000636474 1715 ntBASIC22.37■■□□□ 1.17
LRRC4CQ9HCJ2 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
LRRC4CQ9HCJ2 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC22.37■■□□□ 1.17
LRRC4CQ9HCJ2 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
LRRC4CQ9HCJ2 SENP5-202ENST00000419026 973 ntTSL 3 BASIC22.37■■□□□ 1.17
LRRC4CQ9HCJ2 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC22.37■■□□□ 1.17
LRRC4CQ9HCJ2 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
LRRC4CQ9HCJ2 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
LRRC4CQ9HCJ2 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
LRRC4CQ9HCJ2 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
LRRC4CQ9HCJ2 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
LRRC4CQ9HCJ2 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
LRRC4CQ9HCJ2 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
LRRC4CQ9HCJ2 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
LRRC4CQ9HCJ2 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
LRRC4CQ9HCJ2 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
LRRC4CQ9HCJ2 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC22.36■■□□□ 1.17
LRRC4CQ9HCJ2 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC22.36■■□□□ 1.17
LRRC4CQ9HCJ2 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
LRRC4CQ9HCJ2 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC22.36■■□□□ 1.17
LRRC4CQ9HCJ2 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
LRRC4CQ9HCJ2 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC22.35■■□□□ 1.17
LRRC4CQ9HCJ2 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC22.35■■□□□ 1.17
LRRC4CQ9HCJ2 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC22.35■■□□□ 1.17
LRRC4CQ9HCJ2 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
LRRC4CQ9HCJ2 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
LRRC4CQ9HCJ2 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
LRRC4CQ9HCJ2 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC22.35■■□□□ 1.17
LRRC4CQ9HCJ2 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
LRRC4CQ9HCJ2 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC22.35■■□□□ 1.17
LRRC4CQ9HCJ2 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
LRRC4CQ9HCJ2 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
LRRC4CQ9HCJ2 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
LRRC4CQ9HCJ2 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
LRRC4CQ9HCJ2 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
LRRC4CQ9HCJ2 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
LRRC4CQ9HCJ2 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
LRRC4CQ9HCJ2 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
LRRC4CQ9HCJ2 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
LRRC4CQ9HCJ2 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
LRRC4CQ9HCJ2 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
LRRC4CQ9HCJ2 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
LRRC4CQ9HCJ2 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
LRRC4CQ9HCJ2 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
LRRC4CQ9HCJ2 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
LRRC4CQ9HCJ2 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
LRRC4CQ9HCJ2 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC22.33■■□□□ 1.17
LRRC4CQ9HCJ2 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC22.33■■□□□ 1.17
LRRC4CQ9HCJ2 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
LRRC4CQ9HCJ2 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
LRRC4CQ9HCJ2 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC22.33■■□□□ 1.17
LRRC4CQ9HCJ2 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
LRRC4CQ9HCJ2 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
LRRC4CQ9HCJ2 AC103724.3-201ENST00000564481 992 ntBASIC22.33■■□□□ 1.17
LRRC4CQ9HCJ2 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
LRRC4CQ9HCJ2 AC137630.3-201ENST00000607245 391 ntBASIC22.33■■□□□ 1.17
LRRC4CQ9HCJ2 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC22.33■■□□□ 1.17
LRRC4CQ9HCJ2 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
LRRC4CQ9HCJ2 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.17
LRRC4CQ9HCJ2 FP325331.1-202ENST00000623531 1380 ntBASIC22.33■■□□□ 1.17
LRRC4CQ9HCJ2 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
LRRC4CQ9HCJ2 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.16
LRRC4CQ9HCJ2 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.16
LRRC4CQ9HCJ2 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
LRRC4CQ9HCJ2 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
LRRC4CQ9HCJ2 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC22.32■■□□□ 1.16
LRRC4CQ9HCJ2 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
LRRC4CQ9HCJ2 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
LRRC4CQ9HCJ2 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
LRRC4CQ9HCJ2 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC22.32■■□□□ 1.16
LRRC4CQ9HCJ2 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
LRRC4CQ9HCJ2 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
LRRC4CQ9HCJ2 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
LRRC4CQ9HCJ2 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC22.31■■□□□ 1.16
LRRC4CQ9HCJ2 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
LRRC4CQ9HCJ2 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
LRRC4CQ9HCJ2 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
LRRC4CQ9HCJ2 ASB1-202ENST00000409297 878 ntTSL 5 BASIC22.31■■□□□ 1.16
LRRC4CQ9HCJ2 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
LRRC4CQ9HCJ2 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
LRRC4CQ9HCJ2 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
LRRC4CQ9HCJ2 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
LRRC4CQ9HCJ2 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
LRRC4CQ9HCJ2 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
LRRC4CQ9HCJ2 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
LRRC4CQ9HCJ2 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
LRRC4CQ9HCJ2 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC22.3■■□□□ 1.16
LRRC4CQ9HCJ2 AF106564.1-201ENST00000607058 2553 ntBASIC22.3■■□□□ 1.16
LRRC4CQ9HCJ2 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC22.3■■□□□ 1.16
LRRC4CQ9HCJ2 ME2-206ENST00000638410 2289 ntTSL 5 BASIC22.3■■□□□ 1.16
LRRC4CQ9HCJ2 ME2-210ENST00000639255 2262 ntTSL 5 BASIC22.3■■□□□ 1.16
LRRC4CQ9HCJ2 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
LRRC4CQ9HCJ2 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
LRRC4CQ9HCJ2 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC22.3■■□□□ 1.16
LRRC4CQ9HCJ2 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
LRRC4CQ9HCJ2 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
LRRC4CQ9HCJ2 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
LRRC4CQ9HCJ2 AL157384.1-201ENST00000445995 2473 ntBASIC22.3■■□□□ 1.16
LRRC4CQ9HCJ2 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC22.3■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms