Protein–RNA interactions for Protein: Q9H5V8

CDCP1, CUB domain-containing protein 1, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1Q9H5V8 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDCP1Q9H5V8 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDCP1Q9H5V8 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.3■□□□□ 0.84
CDCP1Q9H5V8 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CDCP1Q9H5V8 AC012414.1-201ENST00000556676 535 ntBASIC20.3■□□□□ 0.84
CDCP1Q9H5V8 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.3■□□□□ 0.84
CDCP1Q9H5V8 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDCP1Q9H5V8 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.3■□□□□ 0.84
CDCP1Q9H5V8 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDCP1Q9H5V8 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CDCP1Q9H5V8 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CDCP1Q9H5V8 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDCP1Q9H5V8 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.29■□□□□ 0.84
CDCP1Q9H5V8 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.29■□□□□ 0.84
CDCP1Q9H5V8 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.29■□□□□ 0.84
CDCP1Q9H5V8 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDCP1Q9H5V8 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CDCP1Q9H5V8 AL354811.1-201ENST00000610286 706 ntBASIC20.29■□□□□ 0.84
CDCP1Q9H5V8 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.29■□□□□ 0.84
CDCP1Q9H5V8 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDCP1Q9H5V8 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDCP1Q9H5V8 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CDCP1Q9H5V8 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CDCP1Q9H5V8 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDCP1Q9H5V8 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.28■□□□□ 0.84
CDCP1Q9H5V8 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDCP1Q9H5V8 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDCP1Q9H5V8 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CDCP1Q9H5V8 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDCP1Q9H5V8 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CDCP1Q9H5V8 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDCP1Q9H5V8 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.28■□□□□ 0.84
CDCP1Q9H5V8 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.28■□□□□ 0.84
CDCP1Q9H5V8 AC068587.7-201ENST00000641602 218 ntBASIC20.28■□□□□ 0.84
CDCP1Q9H5V8 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.28■□□□□ 0.84
CDCP1Q9H5V8 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDCP1Q9H5V8 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CDCP1Q9H5V8 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.27■□□□□ 0.84
CDCP1Q9H5V8 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDCP1Q9H5V8 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDCP1Q9H5V8 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDCP1Q9H5V8 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CDCP1Q9H5V8 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CDCP1Q9H5V8 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
CDCP1Q9H5V8 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDCP1Q9H5V8 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.27■□□□□ 0.84
CDCP1Q9H5V8 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.27■□□□□ 0.84
CDCP1Q9H5V8 AC105233.4-201ENST00000642045 216 ntBASIC20.27■□□□□ 0.84
CDCP1Q9H5V8 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDCP1Q9H5V8 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CDCP1Q9H5V8 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.27■□□□□ 0.83
CDCP1Q9H5V8 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CDCP1Q9H5V8 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CDCP1Q9H5V8 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CDCP1Q9H5V8 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CDCP1Q9H5V8 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
CDCP1Q9H5V8 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.83
CDCP1Q9H5V8 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
CDCP1Q9H5V8 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CDCP1Q9H5V8 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDCP1Q9H5V8 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CDCP1Q9H5V8 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.26■□□□□ 0.83
CDCP1Q9H5V8 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDCP1Q9H5V8 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CDCP1Q9H5V8 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.26■□□□□ 0.83
CDCP1Q9H5V8 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDCP1Q9H5V8 YBX1P1-201ENST00000445822 960 ntBASIC20.26■□□□□ 0.83
CDCP1Q9H5V8 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.26■□□□□ 0.83
CDCP1Q9H5V8 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CDCP1Q9H5V8 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDCP1Q9H5V8 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDCP1Q9H5V8 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.26■□□□□ 0.83
CDCP1Q9H5V8 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDCP1Q9H5V8 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.26■□□□□ 0.83
CDCP1Q9H5V8 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDCP1Q9H5V8 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDCP1Q9H5V8 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDCP1Q9H5V8 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDCP1Q9H5V8 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
CDCP1Q9H5V8 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDCP1Q9H5V8 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDCP1Q9H5V8 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDCP1Q9H5V8 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDCP1Q9H5V8 AC027612.3-201ENST00000413684 1047 ntBASIC20.25■□□□□ 0.83
CDCP1Q9H5V8 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDCP1Q9H5V8 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.25■□□□□ 0.83
CDCP1Q9H5V8 AC087239.1-201ENST00000622671 572 ntBASIC20.25■□□□□ 0.83
CDCP1Q9H5V8 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDCP1Q9H5V8 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDCP1Q9H5V8 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDCP1Q9H5V8 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.25■□□□□ 0.83
CDCP1Q9H5V8 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDCP1Q9H5V8 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDCP1Q9H5V8 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CDCP1Q9H5V8 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDCP1Q9H5V8 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDCP1Q9H5V8 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDCP1Q9H5V8 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDCP1Q9H5V8 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDCP1Q9H5V8 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms