Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC22.21■■□□□ 1.15
CDC42EP4Q9H3Q1 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDC42EP4Q9H3Q1 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDC42EP4Q9H3Q1 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC22.21■■□□□ 1.15
CDC42EP4Q9H3Q1 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDC42EP4Q9H3Q1 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CDC42EP4Q9H3Q1 TSPY13P-201ENST00000338964 914 ntBASIC22.21■■□□□ 1.15
CDC42EP4Q9H3Q1 CA15P2-201ENST00000611168 834 ntBASIC22.21■■□□□ 1.15
CDC42EP4Q9H3Q1 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC22.21■■□□□ 1.15
CDC42EP4Q9H3Q1 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDC42EP4Q9H3Q1 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC22.21■■□□□ 1.15
CDC42EP4Q9H3Q1 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
CDC42EP4Q9H3Q1 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
CDC42EP4Q9H3Q1 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CDC42EP4Q9H3Q1 AC004687.1-201ENST00000579003 1625 ntBASIC22.2■■□□□ 1.15
CDC42EP4Q9H3Q1 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC22.2■■□□□ 1.14
CDC42EP4Q9H3Q1 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
CDC42EP4Q9H3Q1 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
CDC42EP4Q9H3Q1 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
CDC42EP4Q9H3Q1 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC22.2■■□□□ 1.14
CDC42EP4Q9H3Q1 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CDC42EP4Q9H3Q1 GOLGA2P6-201ENST00000340929 2049 ntBASIC22.2■■□□□ 1.14
CDC42EP4Q9H3Q1 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CDC42EP4Q9H3Q1 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
CDC42EP4Q9H3Q1 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CDC42EP4Q9H3Q1 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
CDC42EP4Q9H3Q1 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC22.2■■□□□ 1.14
CDC42EP4Q9H3Q1 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CDC42EP4Q9H3Q1 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CDC42EP4Q9H3Q1 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CDC42EP4Q9H3Q1 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CDC42EP4Q9H3Q1 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
CDC42EP4Q9H3Q1 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
CDC42EP4Q9H3Q1 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CDC42EP4Q9H3Q1 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CDC42EP4Q9H3Q1 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC22.19■■□□□ 1.14
CDC42EP4Q9H3Q1 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC22.19■■□□□ 1.14
CDC42EP4Q9H3Q1 AC103834.1-201ENST00000520383 144 ntBASIC22.19■■□□□ 1.14
CDC42EP4Q9H3Q1 AC137630.3-201ENST00000607245 391 ntBASIC22.19■■□□□ 1.14
CDC42EP4Q9H3Q1 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC22.19■■□□□ 1.14
CDC42EP4Q9H3Q1 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC22.19■■□□□ 1.14
CDC42EP4Q9H3Q1 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
CDC42EP4Q9H3Q1 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CDC42EP4Q9H3Q1 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC22.19■■□□□ 1.14
CDC42EP4Q9H3Q1 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CDC42EP4Q9H3Q1 ME2-206ENST00000638410 2289 ntTSL 5 BASIC22.19■■□□□ 1.14
CDC42EP4Q9H3Q1 ME2-210ENST00000639255 2262 ntTSL 5 BASIC22.19■■□□□ 1.14
CDC42EP4Q9H3Q1 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
CDC42EP4Q9H3Q1 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC22.19■■□□□ 1.14
CDC42EP4Q9H3Q1 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CDC42EP4Q9H3Q1 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CDC42EP4Q9H3Q1 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDC42EP4Q9H3Q1 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDC42EP4Q9H3Q1 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDC42EP4Q9H3Q1 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
CDC42EP4Q9H3Q1 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDC42EP4Q9H3Q1 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC22.18■■□□□ 1.14
CDC42EP4Q9H3Q1 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC22.18■■□□□ 1.14
CDC42EP4Q9H3Q1 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC22.18■■□□□ 1.14
CDC42EP4Q9H3Q1 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDC42EP4Q9H3Q1 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC22.18■■□□□ 1.14
CDC42EP4Q9H3Q1 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDC42EP4Q9H3Q1 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDC42EP4Q9H3Q1 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
CDC42EP4Q9H3Q1 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDC42EP4Q9H3Q1 GUK1-208ENST00000366728 842 ntTSL 2 BASIC22.18■■□□□ 1.14
CDC42EP4Q9H3Q1 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDC42EP4Q9H3Q1 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
CDC42EP4Q9H3Q1 MIR6722-201ENST00000617286 78 ntBASIC22.18■■□□□ 1.14
CDC42EP4Q9H3Q1 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CDC42EP4Q9H3Q1 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CDC42EP4Q9H3Q1 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CDC42EP4Q9H3Q1 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CDC42EP4Q9H3Q1 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC22.17■■□□□ 1.14
CDC42EP4Q9H3Q1 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC22.17■■□□□ 1.14
CDC42EP4Q9H3Q1 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CDC42EP4Q9H3Q1 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CDC42EP4Q9H3Q1 AC103724.3-201ENST00000564481 992 ntBASIC22.17■■□□□ 1.14
CDC42EP4Q9H3Q1 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC22.17■■□□□ 1.14
CDC42EP4Q9H3Q1 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
CDC42EP4Q9H3Q1 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
CDC42EP4Q9H3Q1 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
CDC42EP4Q9H3Q1 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CDC42EP4Q9H3Q1 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CDC42EP4Q9H3Q1 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
CDC42EP4Q9H3Q1 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CDC42EP4Q9H3Q1 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CDC42EP4Q9H3Q1 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CDC42EP4Q9H3Q1 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CDC42EP4Q9H3Q1 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC22.16■■□□□ 1.14
CDC42EP4Q9H3Q1 CLTA-210ENST00000540080 989 ntTSL 2 BASIC22.16■■□□□ 1.14
CDC42EP4Q9H3Q1 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CDC42EP4Q9H3Q1 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CDC42EP4Q9H3Q1 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC22.16■■□□□ 1.14
CDC42EP4Q9H3Q1 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CDC42EP4Q9H3Q1 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC22.15■■□□□ 1.14
CDC42EP4Q9H3Q1 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC22.15■■□□□ 1.14
CDC42EP4Q9H3Q1 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
CDC42EP4Q9H3Q1 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
CDC42EP4Q9H3Q1 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms