Protein–RNA interactions for Protein: Q9H320

VCX, Variable charge X-linked protein 1, humanhuman

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCXQ9H320 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
VCXQ9H320 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
VCXQ9H320 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VCXQ9H320 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.82■□□□□ 0.92
VCXQ9H320 AL157400.5-201ENST00000507624 621 ntBASIC20.82■□□□□ 0.92
VCXQ9H320 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.82■□□□□ 0.92
VCXQ9H320 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.82■□□□□ 0.92
VCXQ9H320 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
VCXQ9H320 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
VCXQ9H320 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
VCXQ9H320 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
VCXQ9H320 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
VCXQ9H320 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
VCXQ9H320 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VCXQ9H320 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
VCXQ9H320 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
VCXQ9H320 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VCXQ9H320 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
VCXQ9H320 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VCXQ9H320 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.81■□□□□ 0.92
VCXQ9H320 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.81■□□□□ 0.92
VCXQ9H320 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
VCXQ9H320 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.81■□□□□ 0.92
VCXQ9H320 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VCXQ9H320 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VCXQ9H320 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
VCXQ9H320 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.8■□□□□ 0.92
VCXQ9H320 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
VCXQ9H320 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
VCXQ9H320 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VCXQ9H320 ALDH1A3-203ENST00000557963 1670 ntBASIC20.8■□□□□ 0.92
VCXQ9H320 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VCXQ9H320 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
VCXQ9H320 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VCXQ9H320 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.8■□□□□ 0.92
VCXQ9H320 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VCXQ9H320 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.8■□□□□ 0.92
VCXQ9H320 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
VCXQ9H320 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
VCXQ9H320 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.8■□□□□ 0.92
VCXQ9H320 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
VCXQ9H320 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VCXQ9H320 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.79■□□□□ 0.92
VCXQ9H320 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.79■□□□□ 0.92
VCXQ9H320 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VCXQ9H320 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VCXQ9H320 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
VCXQ9H320 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VCXQ9H320 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
VCXQ9H320 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.79■□□□□ 0.92
VCXQ9H320 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.79■□□□□ 0.92
VCXQ9H320 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
VCXQ9H320 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.79■□□□□ 0.92
VCXQ9H320 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
VCXQ9H320 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.78■□□□□ 0.92
VCXQ9H320 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
VCXQ9H320 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.78■□□□□ 0.92
VCXQ9H320 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
VCXQ9H320 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.78■□□□□ 0.92
VCXQ9H320 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.78■□□□□ 0.92
VCXQ9H320 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
VCXQ9H320 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
VCXQ9H320 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
VCXQ9H320 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.78■□□□□ 0.92
VCXQ9H320 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VCXQ9H320 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
VCXQ9H320 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VCXQ9H320 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
VCXQ9H320 AC138932.1-201ENST00000534164 6830 ntBASIC20.77■□□□□ 0.92
VCXQ9H320 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VCXQ9H320 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VCXQ9H320 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.77■□□□□ 0.92
VCXQ9H320 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
VCXQ9H320 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VCXQ9H320 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
VCXQ9H320 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.77■□□□□ 0.91
VCXQ9H320 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
VCXQ9H320 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.76■□□□□ 0.91
VCXQ9H320 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC20.76■□□□□ 0.91
VCXQ9H320 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.76■□□□□ 0.91
VCXQ9H320 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VCXQ9H320 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.76■□□□□ 0.91
VCXQ9H320 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
VCXQ9H320 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.76■□□□□ 0.91
VCXQ9H320 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VCXQ9H320 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VCXQ9H320 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
VCXQ9H320 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.75■□□□□ 0.91
VCXQ9H320 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VCXQ9H320 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.75■□□□□ 0.91
VCXQ9H320 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
VCXQ9H320 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VCXQ9H320 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.75■□□□□ 0.91
VCXQ9H320 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.75■□□□□ 0.91
VCXQ9H320 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.74■□□□□ 0.91
VCXQ9H320 AC010542.4-201ENST00000563151 1910 ntBASIC20.74■□□□□ 0.91
VCXQ9H320 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
VCXQ9H320 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
VCXQ9H320 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.74■□□□□ 0.91
VCXQ9H320 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms