Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
NICN1Q9BSH3 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
NICN1Q9BSH3 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NICN1Q9BSH3 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
NICN1Q9BSH3 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.68■□□□□ 0.58
NICN1Q9BSH3 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.68■□□□□ 0.58
NICN1Q9BSH3 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
NICN1Q9BSH3 YBX1P4-201ENST00000392794 808 ntBASIC18.68■□□□□ 0.58
NICN1Q9BSH3 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NICN1Q9BSH3 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC18.68■□□□□ 0.58
NICN1Q9BSH3 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.68■□□□□ 0.58
NICN1Q9BSH3 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.68■□□□□ 0.58
NICN1Q9BSH3 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.68■□□□□ 0.58
NICN1Q9BSH3 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.68■□□□□ 0.58
NICN1Q9BSH3 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC18.68■□□□□ 0.58
NICN1Q9BSH3 AC012354.3-201ENST00000623734 483 ntBASIC18.68■□□□□ 0.58
NICN1Q9BSH3 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.68■□□□□ 0.58
NICN1Q9BSH3 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
NICN1Q9BSH3 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.68■□□□□ 0.58
NICN1Q9BSH3 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.68■□□□□ 0.58
NICN1Q9BSH3 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.68■□□□□ 0.58
NICN1Q9BSH3 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
NICN1Q9BSH3 FP325331.1-202ENST00000623531 1380 ntBASIC18.68■□□□□ 0.58
NICN1Q9BSH3 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NICN1Q9BSH3 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
NICN1Q9BSH3 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NICN1Q9BSH3 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NICN1Q9BSH3 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NICN1Q9BSH3 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.67■□□□□ 0.58
NICN1Q9BSH3 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.67■□□□□ 0.58
NICN1Q9BSH3 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.67■□□□□ 0.58
NICN1Q9BSH3 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
NICN1Q9BSH3 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NICN1Q9BSH3 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.67■□□□□ 0.58
NICN1Q9BSH3 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NICN1Q9BSH3 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NICN1Q9BSH3 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NICN1Q9BSH3 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NICN1Q9BSH3 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
NICN1Q9BSH3 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NICN1Q9BSH3 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NICN1Q9BSH3 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NICN1Q9BSH3 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NICN1Q9BSH3 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NICN1Q9BSH3 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NICN1Q9BSH3 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NICN1Q9BSH3 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NICN1Q9BSH3 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NICN1Q9BSH3 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NICN1Q9BSH3 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NICN1Q9BSH3 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NICN1Q9BSH3 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NICN1Q9BSH3 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.66■□□□□ 0.58
NICN1Q9BSH3 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NICN1Q9BSH3 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
NICN1Q9BSH3 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
NICN1Q9BSH3 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.66■□□□□ 0.58
NICN1Q9BSH3 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NICN1Q9BSH3 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
NICN1Q9BSH3 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
NICN1Q9BSH3 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NICN1Q9BSH3 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NICN1Q9BSH3 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NICN1Q9BSH3 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.66■□□□□ 0.58
NICN1Q9BSH3 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.65■□□□□ 0.58
NICN1Q9BSH3 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NICN1Q9BSH3 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NICN1Q9BSH3 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
NICN1Q9BSH3 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NICN1Q9BSH3 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
NICN1Q9BSH3 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NICN1Q9BSH3 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NICN1Q9BSH3 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
NICN1Q9BSH3 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NICN1Q9BSH3 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NICN1Q9BSH3 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
NICN1Q9BSH3 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
NICN1Q9BSH3 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
NICN1Q9BSH3 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC18.65■□□□□ 0.58
NICN1Q9BSH3 AC009086.3-201ENST00000623486 1008 ntBASIC18.65■□□□□ 0.58
NICN1Q9BSH3 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.65■□□□□ 0.58
NICN1Q9BSH3 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NICN1Q9BSH3 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
NICN1Q9BSH3 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.65■□□□□ 0.58
NICN1Q9BSH3 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NICN1Q9BSH3 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.65■□□□□ 0.58
NICN1Q9BSH3 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NICN1Q9BSH3 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NICN1Q9BSH3 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
NICN1Q9BSH3 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NICN1Q9BSH3 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NICN1Q9BSH3 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
NICN1Q9BSH3 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NICN1Q9BSH3 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NICN1Q9BSH3 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NICN1Q9BSH3 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NICN1Q9BSH3 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NICN1Q9BSH3 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.64■□□□□ 0.57
NICN1Q9BSH3 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC18.64■□□□□ 0.57
NICN1Q9BSH3 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms