Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC25.89■■□□□ 1.74
NEK1Q96PY6 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
NEK1Q96PY6 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
NEK1Q96PY6 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
NEK1Q96PY6 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.74
NEK1Q96PY6 UNC93B3-201ENST00000308076 687 ntBASIC25.89■■□□□ 1.74
NEK1Q96PY6 PEMT-206ENST00000435340 960 ntTSL 5 BASIC25.89■■□□□ 1.74
NEK1Q96PY6 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.74
NEK1Q96PY6 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC25.89■■□□□ 1.74
NEK1Q96PY6 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
NEK1Q96PY6 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
NEK1Q96PY6 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
NEK1Q96PY6 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
NEK1Q96PY6 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
NEK1Q96PY6 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
NEK1Q96PY6 EI24-211ENST00000534546 1544 ntTSL 2 BASIC25.88■■□□□ 1.73
NEK1Q96PY6 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC25.88■■□□□ 1.73
NEK1Q96PY6 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
NEK1Q96PY6 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
NEK1Q96PY6 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
NEK1Q96PY6 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
NEK1Q96PY6 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
NEK1Q96PY6 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
NEK1Q96PY6 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
NEK1Q96PY6 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
NEK1Q96PY6 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC25.88■■□□□ 1.73
NEK1Q96PY6 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC25.88■■□□□ 1.73
NEK1Q96PY6 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
NEK1Q96PY6 USP45-205ENST00000472914 1617 ntTSL 5 BASIC25.88■■□□□ 1.73
NEK1Q96PY6 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
NEK1Q96PY6 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC25.87■■□□□ 1.73
NEK1Q96PY6 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
NEK1Q96PY6 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
NEK1Q96PY6 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
NEK1Q96PY6 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
NEK1Q96PY6 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
NEK1Q96PY6 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC25.87■■□□□ 1.73
NEK1Q96PY6 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
NEK1Q96PY6 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
NEK1Q96PY6 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC25.86■■□□□ 1.73
NEK1Q96PY6 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
NEK1Q96PY6 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC25.86■■□□□ 1.73
NEK1Q96PY6 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
NEK1Q96PY6 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
NEK1Q96PY6 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
NEK1Q96PY6 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC25.86■■□□□ 1.73
NEK1Q96PY6 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
NEK1Q96PY6 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC25.86■■□□□ 1.73
NEK1Q96PY6 AC092053.2-201ENST00000640557 1818 ntBASIC25.86■■□□□ 1.73
NEK1Q96PY6 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
NEK1Q96PY6 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
NEK1Q96PY6 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC25.86■■□□□ 1.73
NEK1Q96PY6 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC25.85■■□□□ 1.73
NEK1Q96PY6 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
NEK1Q96PY6 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
NEK1Q96PY6 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC25.85■■□□□ 1.73
NEK1Q96PY6 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
NEK1Q96PY6 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC25.85■■□□□ 1.73
NEK1Q96PY6 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
NEK1Q96PY6 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
NEK1Q96PY6 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
NEK1Q96PY6 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
NEK1Q96PY6 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
NEK1Q96PY6 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC25.85■■□□□ 1.73
NEK1Q96PY6 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC25.84■■□□□ 1.73
NEK1Q96PY6 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
NEK1Q96PY6 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
NEK1Q96PY6 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
NEK1Q96PY6 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
NEK1Q96PY6 PTMA-205ENST00000410064 814 ntTSL 2 BASIC25.84■■□□□ 1.73
NEK1Q96PY6 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC25.84■■□□□ 1.73
NEK1Q96PY6 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
NEK1Q96PY6 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC25.84■■□□□ 1.73
NEK1Q96PY6 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
NEK1Q96PY6 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
NEK1Q96PY6 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
NEK1Q96PY6 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
NEK1Q96PY6 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
NEK1Q96PY6 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
NEK1Q96PY6 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
NEK1Q96PY6 RBM38-205ENST00000440234 686 ntTSL 2 BASIC25.83■■□□□ 1.73
NEK1Q96PY6 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC25.83■■□□□ 1.73
NEK1Q96PY6 AC068587.7-201ENST00000641602 218 ntBASIC25.83■■□□□ 1.73
NEK1Q96PY6 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
NEK1Q96PY6 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC25.83■■□□□ 1.73
NEK1Q96PY6 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC25.83■■□□□ 1.73
NEK1Q96PY6 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC25.83■■□□□ 1.72
NEK1Q96PY6 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
NEK1Q96PY6 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC25.82■■□□□ 1.72
NEK1Q96PY6 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
NEK1Q96PY6 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
NEK1Q96PY6 SLC47A1P1-202ENST00000449666 945 ntBASIC25.82■■□□□ 1.72
NEK1Q96PY6 AC024257.2-201ENST00000549699 147 ntBASIC25.82■■□□□ 1.72
NEK1Q96PY6 AL136162.1-201ENST00000607711 1078 ntBASIC25.82■■□□□ 1.72
NEK1Q96PY6 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
NEK1Q96PY6 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC25.82■■□□□ 1.72
NEK1Q96PY6 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
NEK1Q96PY6 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
NEK1Q96PY6 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC25.81■■□□□ 1.72
NEK1Q96PY6 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms