Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNTNAP3BQ96NU0 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNTNAP3BQ96NU0 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNTNAP3BQ96NU0 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNTNAP3BQ96NU0 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CNTNAP3BQ96NU0 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNTNAP3BQ96NU0 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.92■□□□□ 0.94
CNTNAP3BQ96NU0 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNTNAP3BQ96NU0 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.92■□□□□ 0.94
CNTNAP3BQ96NU0 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CNTNAP3BQ96NU0 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CNTNAP3BQ96NU0 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CNTNAP3BQ96NU0 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CNTNAP3BQ96NU0 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.92■□□□□ 0.94
CNTNAP3BQ96NU0 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.92■□□□□ 0.94
CNTNAP3BQ96NU0 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNTNAP3BQ96NU0 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CNTNAP3BQ96NU0 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.91■□□□□ 0.94
CNTNAP3BQ96NU0 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CNTNAP3BQ96NU0 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.91■□□□□ 0.94
CNTNAP3BQ96NU0 AC079140.4-201ENST00000507448 529 ntBASIC20.91■□□□□ 0.94
CNTNAP3BQ96NU0 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.91■□□□□ 0.94
CNTNAP3BQ96NU0 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.91■□□□□ 0.94
CNTNAP3BQ96NU0 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CNTNAP3BQ96NU0 UBE2DNL-204ENST00000602536 740 ntBASIC20.91■□□□□ 0.94
CNTNAP3BQ96NU0 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNTNAP3BQ96NU0 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CNTNAP3BQ96NU0 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNTNAP3BQ96NU0 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.9■□□□□ 0.94
CNTNAP3BQ96NU0 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNTNAP3BQ96NU0 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CNTNAP3BQ96NU0 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.9■□□□□ 0.94
CNTNAP3BQ96NU0 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNTNAP3BQ96NU0 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
CNTNAP3BQ96NU0 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.9■□□□□ 0.94
CNTNAP3BQ96NU0 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.9■□□□□ 0.94
CNTNAP3BQ96NU0 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.9■□□□□ 0.94
CNTNAP3BQ96NU0 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CNTNAP3BQ96NU0 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.9■□□□□ 0.94
CNTNAP3BQ96NU0 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
CNTNAP3BQ96NU0 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.89■□□□□ 0.94
CNTNAP3BQ96NU0 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
CNTNAP3BQ96NU0 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CNTNAP3BQ96NU0 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.89■□□□□ 0.93
CNTNAP3BQ96NU0 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNTNAP3BQ96NU0 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNTNAP3BQ96NU0 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CNTNAP3BQ96NU0 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNTNAP3BQ96NU0 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CNTNAP3BQ96NU0 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.89■□□□□ 0.93
CNTNAP3BQ96NU0 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.89■□□□□ 0.93
CNTNAP3BQ96NU0 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.89■□□□□ 0.93
CNTNAP3BQ96NU0 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.89■□□□□ 0.93
CNTNAP3BQ96NU0 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CNTNAP3BQ96NU0 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.89■□□□□ 0.93
CNTNAP3BQ96NU0 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNTNAP3BQ96NU0 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
CNTNAP3BQ96NU0 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CNTNAP3BQ96NU0 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CNTNAP3BQ96NU0 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CNTNAP3BQ96NU0 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.88■□□□□ 0.93
CNTNAP3BQ96NU0 AP004609.3-201ENST00000610705 1884 ntBASIC20.88■□□□□ 0.93
CNTNAP3BQ96NU0 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNTNAP3BQ96NU0 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNTNAP3BQ96NU0 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNTNAP3BQ96NU0 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNTNAP3BQ96NU0 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CNTNAP3BQ96NU0 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNTNAP3BQ96NU0 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.88■□□□□ 0.93
CNTNAP3BQ96NU0 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.88■□□□□ 0.93
CNTNAP3BQ96NU0 AC073648.6-201ENST00000641589 218 ntBASIC20.88■□□□□ 0.93
CNTNAP3BQ96NU0 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNTNAP3BQ96NU0 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNTNAP3BQ96NU0 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNTNAP3BQ96NU0 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
CNTNAP3BQ96NU0 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.87■□□□□ 0.93
CNTNAP3BQ96NU0 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CNTNAP3BQ96NU0 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CNTNAP3BQ96NU0 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNTNAP3BQ96NU0 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.87■□□□□ 0.93
CNTNAP3BQ96NU0 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.87■□□□□ 0.93
CNTNAP3BQ96NU0 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.87■□□□□ 0.93
CNTNAP3BQ96NU0 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CNTNAP3BQ96NU0 CNN2P6-201ENST00000439038 900 ntBASIC20.87■□□□□ 0.93
CNTNAP3BQ96NU0 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.87■□□□□ 0.93
CNTNAP3BQ96NU0 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.87■□□□□ 0.93
CNTNAP3BQ96NU0 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNTNAP3BQ96NU0 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.87■□□□□ 0.93
CNTNAP3BQ96NU0 AC083880.1-201ENST00000608266 535 ntBASIC20.87■□□□□ 0.93
CNTNAP3BQ96NU0 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CNTNAP3BQ96NU0 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.87■□□□□ 0.93
CNTNAP3BQ96NU0 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.87■□□□□ 0.93
CNTNAP3BQ96NU0 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNTNAP3BQ96NU0 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CNTNAP3BQ96NU0 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CNTNAP3BQ96NU0 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
CNTNAP3BQ96NU0 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CNTNAP3BQ96NU0 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.86■□□□□ 0.93
CNTNAP3BQ96NU0 SNORA78-201ENST00000459373 127 ntBASIC20.86■□□□□ 0.93
CNTNAP3BQ96NU0 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms