Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SH3KBP1Q96B97 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
SH3KBP1Q96B97 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
SH3KBP1Q96B97 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SH3KBP1Q96B97 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SH3KBP1Q96B97 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SH3KBP1Q96B97 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
SH3KBP1Q96B97 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
SH3KBP1Q96B97 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SH3KBP1Q96B97 IGHV3-19-201ENST00000521488 291 ntBASIC21.54■■□□□ 1.04
SH3KBP1Q96B97 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.54■■□□□ 1.04
SH3KBP1Q96B97 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
SH3KBP1Q96B97 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.54■■□□□ 1.04
SH3KBP1Q96B97 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
SH3KBP1Q96B97 TSPY26P-201ENST00000476365 1326 ntBASIC21.54■■□□□ 1.04
SH3KBP1Q96B97 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.53■■□□□ 1.04
SH3KBP1Q96B97 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
SH3KBP1Q96B97 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SH3KBP1Q96B97 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.53■■□□□ 1.04
SH3KBP1Q96B97 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SH3KBP1Q96B97 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SH3KBP1Q96B97 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
SH3KBP1Q96B97 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
SH3KBP1Q96B97 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SH3KBP1Q96B97 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SH3KBP1Q96B97 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.53■■□□□ 1.04
SH3KBP1Q96B97 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SH3KBP1Q96B97 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
SH3KBP1Q96B97 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.53■■□□□ 1.04
SH3KBP1Q96B97 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
SH3KBP1Q96B97 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.52■■□□□ 1.04
SH3KBP1Q96B97 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
SH3KBP1Q96B97 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.52■■□□□ 1.04
SH3KBP1Q96B97 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.52■■□□□ 1.04
SH3KBP1Q96B97 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.52■■□□□ 1.04
SH3KBP1Q96B97 MIR6821-201ENST00000617625 74 ntBASIC21.52■■□□□ 1.04
SH3KBP1Q96B97 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SH3KBP1Q96B97 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
SH3KBP1Q96B97 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
SH3KBP1Q96B97 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.52■■□□□ 1.04
SH3KBP1Q96B97 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SH3KBP1Q96B97 DUSP8P3-201ENST00000399571 1760 ntBASIC21.51■■□□□ 1.03
SH3KBP1Q96B97 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SH3KBP1Q96B97 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SH3KBP1Q96B97 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.51■■□□□ 1.03
SH3KBP1Q96B97 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SH3KBP1Q96B97 AC097381.1-201ENST00000429019 1296 ntBASIC21.51■■□□□ 1.03
SH3KBP1Q96B97 AP005435.1-201ENST00000529293 1178 ntBASIC21.51■■□□□ 1.03
SH3KBP1Q96B97 PKD1P6-201ENST00000343738 4769 ntBASIC21.51■■□□□ 1.03
SH3KBP1Q96B97 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SH3KBP1Q96B97 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.51■■□□□ 1.03
SH3KBP1Q96B97 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.51■■□□□ 1.03
SH3KBP1Q96B97 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
SH3KBP1Q96B97 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
SH3KBP1Q96B97 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.5■■□□□ 1.03
SH3KBP1Q96B97 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
SH3KBP1Q96B97 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SH3KBP1Q96B97 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
SH3KBP1Q96B97 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.5■■□□□ 1.03
SH3KBP1Q96B97 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.5■■□□□ 1.03
SH3KBP1Q96B97 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SH3KBP1Q96B97 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SH3KBP1Q96B97 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
SH3KBP1Q96B97 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
SH3KBP1Q96B97 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
SH3KBP1Q96B97 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.5■■□□□ 1.03
SH3KBP1Q96B97 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SH3KBP1Q96B97 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SH3KBP1Q96B97 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SH3KBP1Q96B97 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SH3KBP1Q96B97 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SH3KBP1Q96B97 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.49■■□□□ 1.03
SH3KBP1Q96B97 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SH3KBP1Q96B97 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.49■■□□□ 1.03
SH3KBP1Q96B97 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SH3KBP1Q96B97 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.49■■□□□ 1.03
SH3KBP1Q96B97 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.49■■□□□ 1.03
SH3KBP1Q96B97 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SH3KBP1Q96B97 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SH3KBP1Q96B97 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.49■■□□□ 1.03
SH3KBP1Q96B97 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
SH3KBP1Q96B97 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
SH3KBP1Q96B97 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SH3KBP1Q96B97 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
SH3KBP1Q96B97 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SH3KBP1Q96B97 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SH3KBP1Q96B97 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.48■■□□□ 1.03
SH3KBP1Q96B97 AC010525.1-201ENST00000585559 441 ntBASIC21.48■■□□□ 1.03
SH3KBP1Q96B97 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.48■■□□□ 1.03
SH3KBP1Q96B97 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SH3KBP1Q96B97 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SH3KBP1Q96B97 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SH3KBP1Q96B97 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SH3KBP1Q96B97 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.47■■□□□ 1.03
SH3KBP1Q96B97 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SH3KBP1Q96B97 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SH3KBP1Q96B97 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SH3KBP1Q96B97 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.47■■□□□ 1.03
SH3KBP1Q96B97 MIR572-201ENST00000384983 95 ntBASIC21.47■■□□□ 1.03
SH3KBP1Q96B97 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms