Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MBD3L1Q8WWY6 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
MBD3L1Q8WWY6 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MBD3L1Q8WWY6 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC17.11■□□□□ 0.33
MBD3L1Q8WWY6 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC17.11■□□□□ 0.33
MBD3L1Q8WWY6 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
MBD3L1Q8WWY6 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MBD3L1Q8WWY6 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.11■□□□□ 0.33
MBD3L1Q8WWY6 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MBD3L1Q8WWY6 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
MBD3L1Q8WWY6 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
MBD3L1Q8WWY6 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
MBD3L1Q8WWY6 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
MBD3L1Q8WWY6 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.1■□□□□ 0.33
MBD3L1Q8WWY6 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
MBD3L1Q8WWY6 AC007952.6-201ENST00000573168 2673 ntBASIC17.1■□□□□ 0.33
MBD3L1Q8WWY6 AC003957.1-201ENST00000625108 2673 ntBASIC17.1■□□□□ 0.33
MBD3L1Q8WWY6 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MBD3L1Q8WWY6 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC17.1■□□□□ 0.33
MBD3L1Q8WWY6 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MBD3L1Q8WWY6 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
MBD3L1Q8WWY6 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MBD3L1Q8WWY6 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
MBD3L1Q8WWY6 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MBD3L1Q8WWY6 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.1■□□□□ 0.33
MBD3L1Q8WWY6 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.1■□□□□ 0.33
MBD3L1Q8WWY6 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MBD3L1Q8WWY6 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MBD3L1Q8WWY6 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
MBD3L1Q8WWY6 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MBD3L1Q8WWY6 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MBD3L1Q8WWY6 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MBD3L1Q8WWY6 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MBD3L1Q8WWY6 MLEC-202ENST00000412616 841 ntTSL 3 BASIC17.09■□□□□ 0.33
MBD3L1Q8WWY6 MACF1-219ENST00000484793 834 ntTSL 2 BASIC17.09■□□□□ 0.33
MBD3L1Q8WWY6 AC011551.1-201ENST00000614101 683 ntBASIC17.09■□□□□ 0.33
MBD3L1Q8WWY6 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MBD3L1Q8WWY6 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MBD3L1Q8WWY6 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MBD3L1Q8WWY6 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
MBD3L1Q8WWY6 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MBD3L1Q8WWY6 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.09■□□□□ 0.33
MBD3L1Q8WWY6 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
MBD3L1Q8WWY6 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
MBD3L1Q8WWY6 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
MBD3L1Q8WWY6 RNF165-205ENST00000588679 2904 ntBASIC17.09■□□□□ 0.33
MBD3L1Q8WWY6 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.09■□□□□ 0.33
MBD3L1Q8WWY6 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MBD3L1Q8WWY6 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
MBD3L1Q8WWY6 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
MBD3L1Q8WWY6 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
MBD3L1Q8WWY6 LINC01006-201ENST00000333319 2292 ntBASIC17.08■□□□□ 0.33
MBD3L1Q8WWY6 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
MBD3L1Q8WWY6 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
MBD3L1Q8WWY6 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
MBD3L1Q8WWY6 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC17.08■□□□□ 0.33
MBD3L1Q8WWY6 LINC01960-201ENST00000563759 1884 ntBASIC17.08■□□□□ 0.33
MBD3L1Q8WWY6 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.08■□□□□ 0.33
MBD3L1Q8WWY6 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.08■□□□□ 0.33
MBD3L1Q8WWY6 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
MBD3L1Q8WWY6 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MBD3L1Q8WWY6 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MBD3L1Q8WWY6 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MBD3L1Q8WWY6 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MBD3L1Q8WWY6 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MBD3L1Q8WWY6 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MBD3L1Q8WWY6 LBH-205ENST00000407930 756 ntTSL 2 BASIC17.08■□□□□ 0.32
MBD3L1Q8WWY6 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
MBD3L1Q8WWY6 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC17.08■□□□□ 0.32
MBD3L1Q8WWY6 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MBD3L1Q8WWY6 HES4-204ENST00000484667 667 ntTSL 3 BASIC17.08■□□□□ 0.32
MBD3L1Q8WWY6 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC17.08■□□□□ 0.32
MBD3L1Q8WWY6 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MBD3L1Q8WWY6 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MBD3L1Q8WWY6 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
MBD3L1Q8WWY6 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
MBD3L1Q8WWY6 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
MBD3L1Q8WWY6 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MBD3L1Q8WWY6 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MBD3L1Q8WWY6 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MBD3L1Q8WWY6 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MBD3L1Q8WWY6 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
MBD3L1Q8WWY6 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
MBD3L1Q8WWY6 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MBD3L1Q8WWY6 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MBD3L1Q8WWY6 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
MBD3L1Q8WWY6 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.07■□□□□ 0.32
MBD3L1Q8WWY6 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MBD3L1Q8WWY6 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
MBD3L1Q8WWY6 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC17.07■□□□□ 0.32
MBD3L1Q8WWY6 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
MBD3L1Q8WWY6 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MBD3L1Q8WWY6 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
MBD3L1Q8WWY6 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
MBD3L1Q8WWY6 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MBD3L1Q8WWY6 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
MBD3L1Q8WWY6 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
MBD3L1Q8WWY6 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MBD3L1Q8WWY6 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MBD3L1Q8WWY6 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms