Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.15■□□□□ 0.82
CHD6Q8TD26 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CHD6Q8TD26 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.15■□□□□ 0.82
CHD6Q8TD26 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CHD6Q8TD26 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHD6Q8TD26 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
CHD6Q8TD26 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
CHD6Q8TD26 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CHD6Q8TD26 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.14■□□□□ 0.82
CHD6Q8TD26 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.14■□□□□ 0.82
CHD6Q8TD26 OR10C1-204ENST00000622521 1039 ntBASIC20.14■□□□□ 0.82
CHD6Q8TD26 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.14■□□□□ 0.81
CHD6Q8TD26 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.14■□□□□ 0.81
CHD6Q8TD26 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CHD6Q8TD26 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHD6Q8TD26 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHD6Q8TD26 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.13■□□□□ 0.81
CHD6Q8TD26 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHD6Q8TD26 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CHD6Q8TD26 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CHD6Q8TD26 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.13■□□□□ 0.81
CHD6Q8TD26 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.13■□□□□ 0.81
CHD6Q8TD26 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.13■□□□□ 0.81
CHD6Q8TD26 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.13■□□□□ 0.81
CHD6Q8TD26 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CHD6Q8TD26 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CHD6Q8TD26 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CHD6Q8TD26 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CHD6Q8TD26 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
CHD6Q8TD26 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
CHD6Q8TD26 AL022069.1-201ENST00000568025 1636 ntBASIC20.13■□□□□ 0.81
CHD6Q8TD26 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHD6Q8TD26 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.12■□□□□ 0.81
CHD6Q8TD26 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CHD6Q8TD26 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CHD6Q8TD26 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CHD6Q8TD26 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.12■□□□□ 0.81
CHD6Q8TD26 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CHD6Q8TD26 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.12■□□□□ 0.81
CHD6Q8TD26 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
CHD6Q8TD26 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHD6Q8TD26 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CHD6Q8TD26 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHD6Q8TD26 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHD6Q8TD26 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.11■□□□□ 0.81
CHD6Q8TD26 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHD6Q8TD26 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHD6Q8TD26 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.11■□□□□ 0.81
CHD6Q8TD26 AC087499.1-201ENST00000418141 1075 ntBASIC20.11■□□□□ 0.81
CHD6Q8TD26 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.11■□□□□ 0.81
CHD6Q8TD26 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.11■□□□□ 0.81
CHD6Q8TD26 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.11■□□□□ 0.81
CHD6Q8TD26 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.11■□□□□ 0.81
CHD6Q8TD26 AL590326.2-201ENST00000625139 305 ntBASIC20.11■□□□□ 0.81
CHD6Q8TD26 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHD6Q8TD26 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHD6Q8TD26 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHD6Q8TD26 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CHD6Q8TD26 AL121894.2-201ENST00000602977 491 ntBASIC20.11■□□□□ 0.81
CHD6Q8TD26 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.11■□□□□ 0.81
CHD6Q8TD26 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHD6Q8TD26 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CHD6Q8TD26 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHD6Q8TD26 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CHD6Q8TD26 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHD6Q8TD26 CYP2T1P-201ENST00000432607 1285 ntBASIC20.1■□□□□ 0.81
CHD6Q8TD26 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC20.1■□□□□ 0.81
CHD6Q8TD26 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.1■□□□□ 0.81
CHD6Q8TD26 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CHD6Q8TD26 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.1■□□□□ 0.81
CHD6Q8TD26 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHD6Q8TD26 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHD6Q8TD26 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
CHD6Q8TD26 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.09■□□□□ 0.81
CHD6Q8TD26 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.09■□□□□ 0.81
CHD6Q8TD26 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CHD6Q8TD26 AC068338.2-201ENST00000563278 1430 ntBASIC20.09■□□□□ 0.81
CHD6Q8TD26 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CHD6Q8TD26 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.09■□□□□ 0.81
CHD6Q8TD26 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CHD6Q8TD26 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.09■□□□□ 0.81
CHD6Q8TD26 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.09■□□□□ 0.81
CHD6Q8TD26 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.08■□□□□ 0.81
CHD6Q8TD26 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CHD6Q8TD26 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CHD6Q8TD26 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CHD6Q8TD26 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CHD6Q8TD26 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
CHD6Q8TD26 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CHD6Q8TD26 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
CHD6Q8TD26 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.08■□□□□ 0.8
CHD6Q8TD26 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.08■□□□□ 0.8
CHD6Q8TD26 FAM197Y4-202ENST00000622692 608 ntBASIC20.08■□□□□ 0.8
CHD6Q8TD26 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CHD6Q8TD26 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CHD6Q8TD26 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHD6Q8TD26 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHD6Q8TD26 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.07■□□□□ 0.8
CHD6Q8TD26 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHD6Q8TD26 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms