Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDND2Q8NHS1 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDND2Q8NHS1 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CLDND2Q8NHS1 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.5■□□□□ 0.55
CLDND2Q8NHS1 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDND2Q8NHS1 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLDND2Q8NHS1 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLDND2Q8NHS1 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CLDND2Q8NHS1 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CLDND2Q8NHS1 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLDND2Q8NHS1 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CLDND2Q8NHS1 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLDND2Q8NHS1 MIR572-201ENST00000384983 95 ntBASIC18.49■□□□□ 0.55
CLDND2Q8NHS1 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLDND2Q8NHS1 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CLDND2Q8NHS1 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.49■□□□□ 0.55
CLDND2Q8NHS1 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.49■□□□□ 0.55
CLDND2Q8NHS1 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CLDND2Q8NHS1 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLDND2Q8NHS1 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLDND2Q8NHS1 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLDND2Q8NHS1 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLDND2Q8NHS1 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLDND2Q8NHS1 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLDND2Q8NHS1 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLDND2Q8NHS1 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLDND2Q8NHS1 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.48■□□□□ 0.55
CLDND2Q8NHS1 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.48■□□□□ 0.55
CLDND2Q8NHS1 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.48■□□□□ 0.55
CLDND2Q8NHS1 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDND2Q8NHS1 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDND2Q8NHS1 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.48■□□□□ 0.55
CLDND2Q8NHS1 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLDND2Q8NHS1 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLDND2Q8NHS1 AL358852.1-201ENST00000623174 1268 ntBASIC18.48■□□□□ 0.55
CLDND2Q8NHS1 AL024507.2-201ENST00000606070 2574 ntBASIC18.48■□□□□ 0.55
CLDND2Q8NHS1 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CLDND2Q8NHS1 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDND2Q8NHS1 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDND2Q8NHS1 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDND2Q8NHS1 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLDND2Q8NHS1 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDND2Q8NHS1 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDND2Q8NHS1 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDND2Q8NHS1 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDND2Q8NHS1 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.47■□□□□ 0.55
CLDND2Q8NHS1 YBX1P1-201ENST00000445822 960 ntBASIC18.47■□□□□ 0.55
CLDND2Q8NHS1 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.47■□□□□ 0.55
CLDND2Q8NHS1 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.47■□□□□ 0.55
CLDND2Q8NHS1 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDND2Q8NHS1 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDND2Q8NHS1 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.47■□□□□ 0.55
CLDND2Q8NHS1 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDND2Q8NHS1 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLDND2Q8NHS1 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDND2Q8NHS1 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLDND2Q8NHS1 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDND2Q8NHS1 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLDND2Q8NHS1 AC012414.1-201ENST00000556676 535 ntBASIC18.46■□□□□ 0.55
CLDND2Q8NHS1 MIR6084-201ENST00000622012 110 ntBASIC18.46■□□□□ 0.55
CLDND2Q8NHS1 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDND2Q8NHS1 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLDND2Q8NHS1 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CLDND2Q8NHS1 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDND2Q8NHS1 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.46■□□□□ 0.55
CLDND2Q8NHS1 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CLDND2Q8NHS1 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.46■□□□□ 0.54
CLDND2Q8NHS1 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDND2Q8NHS1 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CLDND2Q8NHS1 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDND2Q8NHS1 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.45■□□□□ 0.54
CLDND2Q8NHS1 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.45■□□□□ 0.54
CLDND2Q8NHS1 AC034268.1-201ENST00000441047 882 ntBASIC18.45■□□□□ 0.54
CLDND2Q8NHS1 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CLDND2Q8NHS1 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CLDND2Q8NHS1 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDND2Q8NHS1 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDND2Q8NHS1 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDND2Q8NHS1 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CLDND2Q8NHS1 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CLDND2Q8NHS1 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.45■□□□□ 0.54
CLDND2Q8NHS1 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLDND2Q8NHS1 AC079630.1-202ENST00000618127 1840 ntBASIC18.44■□□□□ 0.54
CLDND2Q8NHS1 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLDND2Q8NHS1 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.44■□□□□ 0.54
CLDND2Q8NHS1 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.44■□□□□ 0.54
CLDND2Q8NHS1 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLDND2Q8NHS1 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLDND2Q8NHS1 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.44■□□□□ 0.54
CLDND2Q8NHS1 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.44■□□□□ 0.54
CLDND2Q8NHS1 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLDND2Q8NHS1 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLDND2Q8NHS1 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLDND2Q8NHS1 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLDND2Q8NHS1 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CLDND2Q8NHS1 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CLDND2Q8NHS1 AC027612.3-201ENST00000413684 1047 ntBASIC18.44■□□□□ 0.54
CLDND2Q8NHS1 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.44■□□□□ 0.54
CLDND2Q8NHS1 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CLDND2Q8NHS1 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms