Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LSMEM1Q8N8F7 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.97■□□□□ 0.79
LSMEM1Q8N8F7 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LSMEM1Q8N8F7 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LSMEM1Q8N8F7 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LSMEM1Q8N8F7 SRD5A1P1-201ENST00000442297 786 ntBASIC19.97■□□□□ 0.79
LSMEM1Q8N8F7 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.97■□□□□ 0.79
LSMEM1Q8N8F7 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.97■□□□□ 0.79
LSMEM1Q8N8F7 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.97■□□□□ 0.79
LSMEM1Q8N8F7 pRNA.6-201ENST00000610482 90 ntBASIC19.97■□□□□ 0.79
LSMEM1Q8N8F7 pRNA.5-201ENST00000612139 90 ntBASIC19.97■□□□□ 0.79
LSMEM1Q8N8F7 pRNA.11-201ENST00000618423 90 ntBASIC19.97■□□□□ 0.79
LSMEM1Q8N8F7 pRNA.13-201ENST00000619112 90 ntBASIC19.97■□□□□ 0.79
LSMEM1Q8N8F7 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
LSMEM1Q8N8F7 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
LSMEM1Q8N8F7 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LSMEM1Q8N8F7 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.97■□□□□ 0.79
LSMEM1Q8N8F7 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LSMEM1Q8N8F7 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LSMEM1Q8N8F7 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LSMEM1Q8N8F7 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
LSMEM1Q8N8F7 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
LSMEM1Q8N8F7 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LSMEM1Q8N8F7 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.96■□□□□ 0.79
LSMEM1Q8N8F7 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
LSMEM1Q8N8F7 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
LSMEM1Q8N8F7 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LSMEM1Q8N8F7 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.96■□□□□ 0.79
LSMEM1Q8N8F7 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.96■□□□□ 0.79
LSMEM1Q8N8F7 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.96■□□□□ 0.79
LSMEM1Q8N8F7 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.96■□□□□ 0.79
LSMEM1Q8N8F7 C11orf96-202ENST00000528572 1834 ntBASIC19.96■□□□□ 0.79
LSMEM1Q8N8F7 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
LSMEM1Q8N8F7 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LSMEM1Q8N8F7 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LSMEM1Q8N8F7 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.96■□□□□ 0.79
LSMEM1Q8N8F7 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LSMEM1Q8N8F7 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LSMEM1Q8N8F7 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LSMEM1Q8N8F7 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
LSMEM1Q8N8F7 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LSMEM1Q8N8F7 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LSMEM1Q8N8F7 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LSMEM1Q8N8F7 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
LSMEM1Q8N8F7 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LSMEM1Q8N8F7 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LSMEM1Q8N8F7 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LSMEM1Q8N8F7 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LSMEM1Q8N8F7 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.95■□□□□ 0.78
LSMEM1Q8N8F7 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LSMEM1Q8N8F7 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.95■□□□□ 0.78
LSMEM1Q8N8F7 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
LSMEM1Q8N8F7 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.94■□□□□ 0.78
LSMEM1Q8N8F7 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LSMEM1Q8N8F7 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
LSMEM1Q8N8F7 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LSMEM1Q8N8F7 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
LSMEM1Q8N8F7 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.94■□□□□ 0.78
LSMEM1Q8N8F7 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.94■□□□□ 0.78
LSMEM1Q8N8F7 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.94■□□□□ 0.78
LSMEM1Q8N8F7 MIR3181-201ENST00000578512 73 ntBASIC19.94■□□□□ 0.78
LSMEM1Q8N8F7 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LSMEM1Q8N8F7 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
LSMEM1Q8N8F7 AL031602.1-201ENST00000633169 911 ntBASIC19.94■□□□□ 0.78
LSMEM1Q8N8F7 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LSMEM1Q8N8F7 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LSMEM1Q8N8F7 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LSMEM1Q8N8F7 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LSMEM1Q8N8F7 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LSMEM1Q8N8F7 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
LSMEM1Q8N8F7 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.93■□□□□ 0.78
LSMEM1Q8N8F7 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
LSMEM1Q8N8F7 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.93■□□□□ 0.78
LSMEM1Q8N8F7 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
LSMEM1Q8N8F7 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
LSMEM1Q8N8F7 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.93■□□□□ 0.78
LSMEM1Q8N8F7 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LSMEM1Q8N8F7 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.93■□□□□ 0.78
LSMEM1Q8N8F7 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.93■□□□□ 0.78
LSMEM1Q8N8F7 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LSMEM1Q8N8F7 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.93■□□□□ 0.78
LSMEM1Q8N8F7 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.93■□□□□ 0.78
LSMEM1Q8N8F7 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
LSMEM1Q8N8F7 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LSMEM1Q8N8F7 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
LSMEM1Q8N8F7 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
LSMEM1Q8N8F7 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LSMEM1Q8N8F7 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LSMEM1Q8N8F7 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LSMEM1Q8N8F7 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LSMEM1Q8N8F7 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LSMEM1Q8N8F7 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
LSMEM1Q8N8F7 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LSMEM1Q8N8F7 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.92■□□□□ 0.78
LSMEM1Q8N8F7 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
LSMEM1Q8N8F7 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.92■□□□□ 0.78
LSMEM1Q8N8F7 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LSMEM1Q8N8F7 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.92■□□□□ 0.78
LSMEM1Q8N8F7 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.92■□□□□ 0.78
LSMEM1Q8N8F7 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms