Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC27.17■■□□□ 1.94
SMC5Q8IY18 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
SMC5Q8IY18 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
SMC5Q8IY18 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC27.16■■□□□ 1.94
SMC5Q8IY18 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC27.16■■□□□ 1.94
SMC5Q8IY18 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
SMC5Q8IY18 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
SMC5Q8IY18 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
SMC5Q8IY18 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC27.16■■□□□ 1.94
SMC5Q8IY18 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
SMC5Q8IY18 MIR3181-201ENST00000578512 73 ntBASIC27.16■■□□□ 1.94
SMC5Q8IY18 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC27.16■■□□□ 1.94
SMC5Q8IY18 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
SMC5Q8IY18 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
SMC5Q8IY18 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
SMC5Q8IY18 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC27.16■■□□□ 1.94
SMC5Q8IY18 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC27.15■■□□□ 1.94
SMC5Q8IY18 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC27.15■■□□□ 1.94
SMC5Q8IY18 STX4-202ENST00000394998 1498 ntTSL 2 BASIC27.15■■□□□ 1.94
SMC5Q8IY18 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC27.15■■□□□ 1.94
SMC5Q8IY18 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC27.15■■□□□ 1.94
SMC5Q8IY18 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
SMC5Q8IY18 AL356441.2-201ENST00000443009 864 ntBASIC27.15■■□□□ 1.94
SMC5Q8IY18 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC27.15■■□□□ 1.94
SMC5Q8IY18 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC27.15■■□□□ 1.94
SMC5Q8IY18 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC27.15■■□□□ 1.94
SMC5Q8IY18 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
SMC5Q8IY18 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC27.15■■□□□ 1.94
SMC5Q8IY18 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC27.15■■□□□ 1.94
SMC5Q8IY18 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC27.15■■□□□ 1.94
SMC5Q8IY18 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
SMC5Q8IY18 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
SMC5Q8IY18 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC27.14■■□□□ 1.94
SMC5Q8IY18 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC27.14■■□□□ 1.94
SMC5Q8IY18 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
SMC5Q8IY18 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
SMC5Q8IY18 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC27.14■■□□□ 1.94
SMC5Q8IY18 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC27.14■■□□□ 1.94
SMC5Q8IY18 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC27.14■■□□□ 1.93
SMC5Q8IY18 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
SMC5Q8IY18 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC27.13■■□□□ 1.93
SMC5Q8IY18 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC27.13■■□□□ 1.93
SMC5Q8IY18 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
SMC5Q8IY18 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
SMC5Q8IY18 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
SMC5Q8IY18 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
SMC5Q8IY18 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC27.13■■□□□ 1.93
SMC5Q8IY18 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
SMC5Q8IY18 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC27.13■■□□□ 1.93
SMC5Q8IY18 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC27.13■■□□□ 1.93
SMC5Q8IY18 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
SMC5Q8IY18 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC27.13■■□□□ 1.93
SMC5Q8IY18 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
SMC5Q8IY18 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
SMC5Q8IY18 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC27.12■■□□□ 1.93
SMC5Q8IY18 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC27.12■■□□□ 1.93
SMC5Q8IY18 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC27.12■■□□□ 1.93
SMC5Q8IY18 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC27.12■■□□□ 1.93
SMC5Q8IY18 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
SMC5Q8IY18 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC27.12■■□□□ 1.93
SMC5Q8IY18 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC27.12■■□□□ 1.93
SMC5Q8IY18 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC27.12■■□□□ 1.93
SMC5Q8IY18 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
SMC5Q8IY18 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC27.12■■□□□ 1.93
SMC5Q8IY18 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
SMC5Q8IY18 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC27.11■■□□□ 1.93
SMC5Q8IY18 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
SMC5Q8IY18 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
SMC5Q8IY18 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC27.11■■□□□ 1.93
SMC5Q8IY18 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
SMC5Q8IY18 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
SMC5Q8IY18 AC010542.4-201ENST00000563151 1910 ntBASIC27.1■■□□□ 1.93
SMC5Q8IY18 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
SMC5Q8IY18 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
SMC5Q8IY18 BID-212ENST00000614949 1988 ntTSL 5 BASIC27.1■■□□□ 1.93
SMC5Q8IY18 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC27.1■■□□□ 1.93
SMC5Q8IY18 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC27.1■■□□□ 1.93
SMC5Q8IY18 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
SMC5Q8IY18 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
SMC5Q8IY18 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
SMC5Q8IY18 AC007375.3-201ENST00000600936 2314 ntBASIC27.1■■□□□ 1.93
SMC5Q8IY18 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SMC5Q8IY18 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC27.09■■□□□ 1.93
SMC5Q8IY18 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
SMC5Q8IY18 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SMC5Q8IY18 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SMC5Q8IY18 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC27.09■■□□□ 1.93
SMC5Q8IY18 USP45-205ENST00000472914 1617 ntTSL 5 BASIC27.09■■□□□ 1.93
SMC5Q8IY18 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC27.09■■□□□ 1.93
SMC5Q8IY18 MIR4466-201ENST00000606121 54 ntBASIC27.09■■□□□ 1.93
SMC5Q8IY18 FBXW4P1-201ENST00000426721 2239 ntBASIC27.09■■□□□ 1.93
SMC5Q8IY18 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SMC5Q8IY18 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SMC5Q8IY18 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC27.08■■□□□ 1.93
SMC5Q8IY18 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
SMC5Q8IY18 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
SMC5Q8IY18 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC27.08■■□□□ 1.93
SMC5Q8IY18 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
SMC5Q8IY18 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
SMC5Q8IY18 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms