Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SHFQ7M4L6 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.67■□□□□ 0.74
SHFQ7M4L6 BX664725.1-201ENST00000438252 379 ntBASIC19.67■□□□□ 0.74
SHFQ7M4L6 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SHFQ7M4L6 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SHFQ7M4L6 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.67■□□□□ 0.74
SHFQ7M4L6 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
SHFQ7M4L6 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.67■□□□□ 0.74
SHFQ7M4L6 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SHFQ7M4L6 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SHFQ7M4L6 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SHFQ7M4L6 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SHFQ7M4L6 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SHFQ7M4L6 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SHFQ7M4L6 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.66■□□□□ 0.74
SHFQ7M4L6 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.66■□□□□ 0.74
SHFQ7M4L6 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SHFQ7M4L6 AC021242.3-201ENST00000607598 1377 ntBASIC19.66■□□□□ 0.74
SHFQ7M4L6 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SHFQ7M4L6 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SHFQ7M4L6 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
SHFQ7M4L6 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SHFQ7M4L6 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SHFQ7M4L6 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
SHFQ7M4L6 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.65■□□□□ 0.74
SHFQ7M4L6 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SHFQ7M4L6 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SHFQ7M4L6 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SHFQ7M4L6 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.65■□□□□ 0.74
SHFQ7M4L6 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.65■□□□□ 0.74
SHFQ7M4L6 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SHFQ7M4L6 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SHFQ7M4L6 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SHFQ7M4L6 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SHFQ7M4L6 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SHFQ7M4L6 LINC01960-201ENST00000563759 1884 ntBASIC19.65■□□□□ 0.74
SHFQ7M4L6 AC005229.4-201ENST00000610085 2198 ntBASIC19.64■□□□□ 0.74
SHFQ7M4L6 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SHFQ7M4L6 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SHFQ7M4L6 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SHFQ7M4L6 FP325331.1-202ENST00000623531 1380 ntBASIC19.64■□□□□ 0.73
SHFQ7M4L6 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SHFQ7M4L6 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SHFQ7M4L6 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SHFQ7M4L6 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.64■□□□□ 0.73
SHFQ7M4L6 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SHFQ7M4L6 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.64■□□□□ 0.73
SHFQ7M4L6 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHFQ7M4L6 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHFQ7M4L6 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SHFQ7M4L6 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SHFQ7M4L6 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHFQ7M4L6 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHFQ7M4L6 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SHFQ7M4L6 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SHFQ7M4L6 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SHFQ7M4L6 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SHFQ7M4L6 LINC01529-204ENST00000636474 1715 ntBASIC19.62■□□□□ 0.73
SHFQ7M4L6 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.62■□□□□ 0.73
SHFQ7M4L6 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.62■□□□□ 0.73
SHFQ7M4L6 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SHFQ7M4L6 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.62■□□□□ 0.73
SHFQ7M4L6 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SHFQ7M4L6 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.62■□□□□ 0.73
SHFQ7M4L6 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
SHFQ7M4L6 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
SHFQ7M4L6 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.61■□□□□ 0.73
SHFQ7M4L6 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHFQ7M4L6 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.61■□□□□ 0.73
SHFQ7M4L6 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHFQ7M4L6 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHFQ7M4L6 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.61■□□□□ 0.73
SHFQ7M4L6 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.61■□□□□ 0.73
SHFQ7M4L6 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SHFQ7M4L6 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.61■□□□□ 0.73
SHFQ7M4L6 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHFQ7M4L6 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SHFQ7M4L6 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.61■□□□□ 0.73
SHFQ7M4L6 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.61■□□□□ 0.73
SHFQ7M4L6 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.61■□□□□ 0.73
SHFQ7M4L6 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.6■□□□□ 0.73
SHFQ7M4L6 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.6■□□□□ 0.73
SHFQ7M4L6 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.6■□□□□ 0.73
SHFQ7M4L6 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.6■□□□□ 0.73
SHFQ7M4L6 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.6■□□□□ 0.73
SHFQ7M4L6 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.6■□□□□ 0.73
SHFQ7M4L6 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.6■□□□□ 0.73
SHFQ7M4L6 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SHFQ7M4L6 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SHFQ7M4L6 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
SHFQ7M4L6 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SHFQ7M4L6 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
SHFQ7M4L6 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHFQ7M4L6 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHFQ7M4L6 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHFQ7M4L6 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
SHFQ7M4L6 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHFQ7M4L6 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
SHFQ7M4L6 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SHFQ7M4L6 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms