Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COLCA1Q6ZS62 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COLCA1Q6ZS62 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COLCA1Q6ZS62 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COLCA1Q6ZS62 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
COLCA1Q6ZS62 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COLCA1Q6ZS62 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COLCA1Q6ZS62 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COLCA1Q6ZS62 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.85■□□□□ 0.61
COLCA1Q6ZS62 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
COLCA1Q6ZS62 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.85■□□□□ 0.61
COLCA1Q6ZS62 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
COLCA1Q6ZS62 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COLCA1Q6ZS62 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.85■□□□□ 0.61
COLCA1Q6ZS62 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.85■□□□□ 0.61
COLCA1Q6ZS62 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.85■□□□□ 0.61
COLCA1Q6ZS62 AC092053.2-201ENST00000640557 1818 ntBASIC18.85■□□□□ 0.61
COLCA1Q6ZS62 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
COLCA1Q6ZS62 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
COLCA1Q6ZS62 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COLCA1Q6ZS62 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
COLCA1Q6ZS62 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
COLCA1Q6ZS62 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.85■□□□□ 0.61
COLCA1Q6ZS62 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COLCA1Q6ZS62 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.84■□□□□ 0.61
COLCA1Q6ZS62 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COLCA1Q6ZS62 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.84■□□□□ 0.61
COLCA1Q6ZS62 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
COLCA1Q6ZS62 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COLCA1Q6ZS62 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
COLCA1Q6ZS62 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.84■□□□□ 0.61
COLCA1Q6ZS62 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COLCA1Q6ZS62 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.84■□□□□ 0.61
COLCA1Q6ZS62 SLC47A1P1-202ENST00000449666 945 ntBASIC18.84■□□□□ 0.61
COLCA1Q6ZS62 AP005435.1-201ENST00000529293 1178 ntBASIC18.84■□□□□ 0.61
COLCA1Q6ZS62 AC024257.2-201ENST00000549699 147 ntBASIC18.84■□□□□ 0.61
COLCA1Q6ZS62 AL136162.1-201ENST00000607711 1078 ntBASIC18.84■□□□□ 0.61
COLCA1Q6ZS62 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.84■□□□□ 0.61
COLCA1Q6ZS62 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.84■□□□□ 0.61
COLCA1Q6ZS62 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
COLCA1Q6ZS62 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
COLCA1Q6ZS62 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
COLCA1Q6ZS62 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
COLCA1Q6ZS62 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.84■□□□□ 0.61
COLCA1Q6ZS62 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
COLCA1Q6ZS62 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
COLCA1Q6ZS62 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COLCA1Q6ZS62 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.83■□□□□ 0.6
COLCA1Q6ZS62 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.83■□□□□ 0.6
COLCA1Q6ZS62 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.83■□□□□ 0.6
COLCA1Q6ZS62 MIR4767-201ENST00000582827 78 ntBASIC18.83■□□□□ 0.6
COLCA1Q6ZS62 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
COLCA1Q6ZS62 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.83■□□□□ 0.6
COLCA1Q6ZS62 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
COLCA1Q6ZS62 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.83■□□□□ 0.6
COLCA1Q6ZS62 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
COLCA1Q6ZS62 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COLCA1Q6ZS62 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COLCA1Q6ZS62 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COLCA1Q6ZS62 AC135279.3-201ENST00000610945 1311 ntBASIC18.82■□□□□ 0.6
COLCA1Q6ZS62 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
COLCA1Q6ZS62 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
COLCA1Q6ZS62 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
COLCA1Q6ZS62 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
COLCA1Q6ZS62 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
COLCA1Q6ZS62 BX842568.3-201ENST00000418104 571 ntBASIC18.82■□□□□ 0.6
COLCA1Q6ZS62 AC010141.3-201ENST00000456659 717 ntBASIC18.82■□□□□ 0.6
COLCA1Q6ZS62 AC079089.2-201ENST00000531211 1277 ntBASIC18.82■□□□□ 0.6
COLCA1Q6ZS62 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.82■□□□□ 0.6
COLCA1Q6ZS62 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COLCA1Q6ZS62 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COLCA1Q6ZS62 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COLCA1Q6ZS62 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
COLCA1Q6ZS62 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.82■□□□□ 0.6
COLCA1Q6ZS62 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COLCA1Q6ZS62 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COLCA1Q6ZS62 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COLCA1Q6ZS62 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COLCA1Q6ZS62 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.81■□□□□ 0.6
COLCA1Q6ZS62 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.81■□□□□ 0.6
COLCA1Q6ZS62 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COLCA1Q6ZS62 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.81■□□□□ 0.6
COLCA1Q6ZS62 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.81■□□□□ 0.6
COLCA1Q6ZS62 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.81■□□□□ 0.6
COLCA1Q6ZS62 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
COLCA1Q6ZS62 AC096631.2-201ENST00000436136 790 ntBASIC18.81■□□□□ 0.6
COLCA1Q6ZS62 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.81■□□□□ 0.6
COLCA1Q6ZS62 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.81■□□□□ 0.6
COLCA1Q6ZS62 AC087239.1-201ENST00000622671 572 ntBASIC18.81■□□□□ 0.6
COLCA1Q6ZS62 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
COLCA1Q6ZS62 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
COLCA1Q6ZS62 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
COLCA1Q6ZS62 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
COLCA1Q6ZS62 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.81■□□□□ 0.6
COLCA1Q6ZS62 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COLCA1Q6ZS62 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COLCA1Q6ZS62 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COLCA1Q6ZS62 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
COLCA1Q6ZS62 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
COLCA1Q6ZS62 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms