Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC13.82□□□□□ -0.2
LINC00575Q6W349 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC13.82□□□□□ -0.2
LINC00575Q6W349 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC13.82□□□□□ -0.2
LINC00575Q6W349 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00575Q6W349 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC13.82□□□□□ -0.2
LINC00575Q6W349 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00575Q6W349 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
LINC00575Q6W349 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
LINC00575Q6W349 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00575Q6W349 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00575Q6W349 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00575Q6W349 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
LINC00575Q6W349 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00575Q6W349 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
LINC00575Q6W349 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00575Q6W349 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00575Q6W349 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC13.81□□□□□ -0.2
LINC00575Q6W349 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00575Q6W349 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
LINC00575Q6W349 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00575Q6W349 AC016575.1-201ENST00000607026 382 ntBASIC13.81□□□□□ -0.2
LINC00575Q6W349 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00575Q6W349 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00575Q6W349 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00575Q6W349 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00575Q6W349 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00575Q6W349 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC13.8□□□□□ -0.2
LINC00575Q6W349 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00575Q6W349 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC13.8□□□□□ -0.2
LINC00575Q6W349 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00575Q6W349 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00575Q6W349 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
LINC00575Q6W349 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
LINC00575Q6W349 AL157384.1-201ENST00000445995 2473 ntBASIC13.8□□□□□ -0.2
LINC00575Q6W349 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
LINC00575Q6W349 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00575Q6W349 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00575Q6W349 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00575Q6W349 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00575Q6W349 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
LINC00575Q6W349 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
LINC00575Q6W349 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC13.8□□□□□ -0.2
LINC00575Q6W349 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00575Q6W349 AC022413.1-201ENST00000624602 984 ntBASIC13.8□□□□□ -0.2
LINC00575Q6W349 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00575Q6W349 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00575Q6W349 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00575Q6W349 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
LINC00575Q6W349 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00575Q6W349 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC13.8□□□□□ -0.2
LINC00575Q6W349 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00575Q6W349 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
LINC00575Q6W349 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC13.8□□□□□ -0.2
LINC00575Q6W349 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00575Q6W349 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00575Q6W349 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00575Q6W349 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00575Q6W349 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00575Q6W349 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00575Q6W349 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00575Q6W349 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00575Q6W349 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
LINC00575Q6W349 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00575Q6W349 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00575Q6W349 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00575Q6W349 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LINC00575Q6W349 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
LINC00575Q6W349 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
LINC00575Q6W349 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
LINC00575Q6W349 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC13.79□□□□□ -0.2
LINC00575Q6W349 TUB-203ENST00000534099 1759 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC00575Q6W349 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC13.78□□□□□ -0.2
LINC00575Q6W349 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00575Q6W349 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
LINC00575Q6W349 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00575Q6W349 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
LINC00575Q6W349 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
LINC00575Q6W349 Z98882.1-201ENST00000622160 2253 ntBASIC13.78□□□□□ -0.2
LINC00575Q6W349 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
LINC00575Q6W349 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC00575Q6W349 AC011551.1-201ENST00000614101 683 ntBASIC13.78□□□□□ -0.2
LINC00575Q6W349 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
LINC00575Q6W349 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00575Q6W349 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00575Q6W349 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
LINC00575Q6W349 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00575Q6W349 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00575Q6W349 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00575Q6W349 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00575Q6W349 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
LINC00575Q6W349 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00575Q6W349 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00575Q6W349 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC00575Q6W349 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
LINC00575Q6W349 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
LINC00575Q6W349 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00575Q6W349 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00575Q6W349 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00575Q6W349 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC00575Q6W349 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms